Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NPHP4O75161 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
NPHP4O75161 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NPHP4O75161 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NPHP4O75161 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPHP4O75161 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC20.37■□□□□ 0.85
NPHP4O75161 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NPHP4O75161 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC20.37■□□□□ 0.85
NPHP4O75161 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NPHP4O75161 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NPHP4O75161 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NPHP4O75161 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPHP4O75161 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPHP4O75161 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
NPHP4O75161 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
NPHP4O75161 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC20.36■□□□□ 0.85
NPHP4O75161 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
NPHP4O75161 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC20.36■□□□□ 0.85
NPHP4O75161 GALP-202ENST00000440823 889 ntTSL 5 BASIC20.36■□□□□ 0.85
NPHP4O75161 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC20.36■□□□□ 0.85
NPHP4O75161 RN7SL128P-201ENST00000467883 305 ntBASIC20.36■□□□□ 0.85
NPHP4O75161 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC20.36■□□□□ 0.85
NPHP4O75161 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC20.36■□□□□ 0.85
NPHP4O75161 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NPHP4O75161 AC091769.1-201ENST00000619576 568 ntBASIC20.36■□□□□ 0.85
NPHP4O75161 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC20.36■□□□□ 0.85
NPHP4O75161 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC20.36■□□□□ 0.85
NPHP4O75161 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC20.36■□□□□ 0.85
NPHP4O75161 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
NPHP4O75161 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 AC010491.1-201ENST00000563101 2797 ntBASIC20.36■□□□□ 0.85
NPHP4O75161 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC20.36■□□□□ 0.85
NPHP4O75161 AL365181.1-201ENST00000564032 1828 ntBASIC20.36■□□□□ 0.85
NPHP4O75161 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 STRN-202ENST00000379213 2254 ntTSL 5 BASIC20.36■□□□□ 0.85
NPHP4O75161 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC20.36■□□□□ 0.85
NPHP4O75161 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC20.36■□□□□ 0.85
NPHP4O75161 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC20.36■□□□□ 0.85
NPHP4O75161 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 ALG1L7P-201ENST00000502317 768 ntBASIC20.36■□□□□ 0.85
NPHP4O75161 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC20.36■□□□□ 0.85
NPHP4O75161 EEF1GP8-201ENST00000506566 1154 ntBASIC20.36■□□□□ 0.85
NPHP4O75161 AC140658.4-201ENST00000561990 352 ntBASIC20.36■□□□□ 0.85
NPHP4O75161 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC20.36■□□□□ 0.85
NPHP4O75161 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC20.36■□□□□ 0.85
NPHP4O75161 AC004466.2-201ENST00000614749 516 ntBASIC20.36■□□□□ 0.85
NPHP4O75161 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NPHP4O75161 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC20.35■□□□□ 0.85
NPHP4O75161 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NPHP4O75161 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPHP4O75161 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC20.35■□□□□ 0.85
NPHP4O75161 API5-203ENST00000455725 2257 ntTSL 2 BASIC20.35■□□□□ 0.85
NPHP4O75161 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NPHP4O75161 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPHP4O75161 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPHP4O75161 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.35■□□□□ 0.85
NPHP4O75161 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPHP4O75161 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPHP4O75161 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NPHP4O75161 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC20.35■□□□□ 0.85
NPHP4O75161 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPHP4O75161 AC138761.6-201ENST00000583997 1423 ntBASIC20.35■□□□□ 0.85
NPHP4O75161 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPHP4O75161 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NPHP4O75161 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NPHP4O75161 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NPHP4O75161 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPHP4O75161 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NPHP4O75161 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC20.35■□□□□ 0.85
NPHP4O75161 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPHP4O75161 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.35■□□□□ 0.85
NPHP4O75161 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPHP4O75161 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.35■□□□□ 0.85
NPHP4O75161 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPHP4O75161 RPL14-203ENST00000416518 812 ntTSL 3 BASIC20.35■□□□□ 0.85
NPHP4O75161 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC20.35■□□□□ 0.85
NPHP4O75161 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC20.35■□□□□ 0.85
NPHP4O75161 RN7SL846P-201ENST00000467429 292 ntBASIC20.35■□□□□ 0.85
NPHP4O75161 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
NPHP4O75161 GPX3-202ENST00000517973 612 ntTSL 3 BASIC20.35■□□□□ 0.85
NPHP4O75161 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC20.35■□□□□ 0.85
NPHP4O75161 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms