Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC11.23□□□□□ -0.61
SH2D1AO60880 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
SH2D1AO60880 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.23□□□□□ -0.61
SH2D1AO60880 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SH2D1AO60880 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC11.23□□□□□ -0.61
SH2D1AO60880 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SH2D1AO60880 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC11.23□□□□□ -0.61
SH2D1AO60880 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SH2D1AO60880 AL627223.1-201ENST00000416693 442 ntBASIC11.23□□□□□ -0.61
SH2D1AO60880 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC11.23□□□□□ -0.61
SH2D1AO60880 RPP21-221ENST00000428040 594 ntTSL 2 BASIC11.23□□□□□ -0.61
SH2D1AO60880 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.23□□□□□ -0.61
SH2D1AO60880 TPM4P1-201ENST00000436100 807 ntBASIC11.23□□□□□ -0.61
SH2D1AO60880 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 ALG1L5P-201ENST00000482043 771 ntBASIC11.23□□□□□ -0.61
SH2D1AO60880 NMU-202ENST00000505262 693 ntTSL 3 BASIC11.23□□□□□ -0.61
SH2D1AO60880 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.23□□□□□ -0.61
SH2D1AO60880 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.23□□□□□ -0.61
SH2D1AO60880 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC11.23□□□□□ -0.61
SH2D1AO60880 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC11.23□□□□□ -0.61
SH2D1AO60880 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC11.23□□□□□ -0.61
SH2D1AO60880 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC11.23□□□□□ -0.61
SH2D1AO60880 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.23□□□□□ -0.61
SH2D1AO60880 AC026150.2-201ENST00000564693 1156 ntBASIC11.23□□□□□ -0.61
SH2D1AO60880 MIR4453-201ENST00000584019 89 ntBASIC11.23□□□□□ -0.61
SH2D1AO60880 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC11.23□□□□□ -0.61
SH2D1AO60880 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC11.23□□□□□ -0.61
SH2D1AO60880 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC11.23□□□□□ -0.61
SH2D1AO60880 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC11.23□□□□□ -0.61
SH2D1AO60880 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SH2D1AO60880 MIR6080-201ENST00000617359 66 ntBASIC11.23□□□□□ -0.61
SH2D1AO60880 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC11.23□□□□□ -0.61
SH2D1AO60880 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
SH2D1AO60880 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.23□□□□□ -0.61
SH2D1AO60880 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC11.23□□□□□ -0.61
SH2D1AO60880 CICP8-201ENST00000455800 2813 ntBASIC11.23□□□□□ -0.61
SH2D1AO60880 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC11.23□□□□□ -0.61
SH2D1AO60880 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SH2D1AO60880 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
SH2D1AO60880 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.23□□□□□ -0.61
SH2D1AO60880 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 AL137783.1-201ENST00000623494 1896 ntBASIC11.23□□□□□ -0.61
SH2D1AO60880 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SH2D1AO60880 TCAF1P1-201ENST00000414990 2232 ntBASIC11.23□□□□□ -0.61
SH2D1AO60880 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC11.23□□□□□ -0.61
SH2D1AO60880 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SH2D1AO60880 AC012617.1-204ENST00000586340 2305 ntBASIC11.23□□□□□ -0.61
SH2D1AO60880 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SH2D1AO60880 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
SH2D1AO60880 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SH2D1AO60880 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SH2D1AO60880 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SH2D1AO60880 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
SH2D1AO60880 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
SH2D1AO60880 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SH2D1AO60880 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SH2D1AO60880 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SH2D1AO60880 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SH2D1AO60880 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SH2D1AO60880 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SH2D1AO60880 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SH2D1AO60880 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SH2D1AO60880 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
SH2D1AO60880 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SH2D1AO60880 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SH2D1AO60880 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
SH2D1AO60880 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SH2D1AO60880 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SH2D1AO60880 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SH2D1AO60880 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SH2D1AO60880 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SH2D1AO60880 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SH2D1AO60880 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
SH2D1AO60880 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SH2D1AO60880 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC11.22□□□□□ -0.61
SH2D1AO60880 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SH2D1AO60880 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SH2D1AO60880 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms