Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.85□□□□□ -0.19
IDH3BO43837 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.85□□□□□ -0.19
IDH3BO43837 AL121723.1-201ENST00000445194 1519 ntBASIC13.85□□□□□ -0.19
IDH3BO43837 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.85□□□□□ -0.19
IDH3BO43837 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.85□□□□□ -0.19
IDH3BO43837 AL031595.1-201ENST00000623969 4709 ntBASIC13.85□□□□□ -0.19
IDH3BO43837 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.85□□□□□ -0.19
IDH3BO43837 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
IDH3BO43837 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.85□□□□□ -0.19
IDH3BO43837 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.85□□□□□ -0.19
IDH3BO43837 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.85□□□□□ -0.19
IDH3BO43837 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.85□□□□□ -0.19
IDH3BO43837 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.85□□□□□ -0.19
IDH3BO43837 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
IDH3BO43837 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
IDH3BO43837 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
IDH3BO43837 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.85□□□□□ -0.19
IDH3BO43837 AF228730.6-201ENST00000641497 218 ntBASIC13.85□□□□□ -0.19
IDH3BO43837 AC084121.3-201ENST00000641716 218 ntBASIC13.85□□□□□ -0.19
IDH3BO43837 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
IDH3BO43837 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.85□□□□□ -0.19
IDH3BO43837 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
IDH3BO43837 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
IDH3BO43837 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
IDH3BO43837 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
IDH3BO43837 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.84□□□□□ -0.19
IDH3BO43837 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
IDH3BO43837 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
IDH3BO43837 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
IDH3BO43837 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.84□□□□□ -0.19
IDH3BO43837 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
IDH3BO43837 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
IDH3BO43837 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.84□□□□□ -0.19
IDH3BO43837 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
IDH3BO43837 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 CNN2P11-201ENST00000429351 262 ntBASIC13.84□□□□□ -0.19
IDH3BO43837 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 AP006288.1-201ENST00000446065 395 ntBASIC13.84□□□□□ -0.19
IDH3BO43837 RN7SL618P-201ENST00000477850 296 ntBASIC13.84□□□□□ -0.19
IDH3BO43837 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.84□□□□□ -0.19
IDH3BO43837 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.84□□□□□ -0.19
IDH3BO43837 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.84□□□□□ -0.19
IDH3BO43837 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.84□□□□□ -0.19
IDH3BO43837 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.84□□□□□ -0.19
IDH3BO43837 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.84□□□□□ -0.19
IDH3BO43837 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.84□□□□□ -0.19
IDH3BO43837 AC092135.3-201ENST00000624151 1846 ntBASIC13.84□□□□□ -0.19
IDH3BO43837 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.84□□□□□ -0.19
IDH3BO43837 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.84□□□□□ -0.19
IDH3BO43837 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
IDH3BO43837 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
IDH3BO43837 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.84□□□□□ -0.19
IDH3BO43837 REXO1L4P-201ENST00000605109 1937 ntBASIC13.84□□□□□ -0.19
IDH3BO43837 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms