Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ACTN4O43707 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.77■□□□□ 0.28
ACTN4O43707 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
ACTN4O43707 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.77■□□□□ 0.28
ACTN4O43707 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ACTN4O43707 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ACTN4O43707 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ACTN4O43707 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ACTN4O43707 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.77■□□□□ 0.28
ACTN4O43707 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ACTN4O43707 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.77■□□□□ 0.28
ACTN4O43707 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.77■□□□□ 0.28
ACTN4O43707 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.77■□□□□ 0.28
ACTN4O43707 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ACTN4O43707 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
ACTN4O43707 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.77■□□□□ 0.28
ACTN4O43707 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.77■□□□□ 0.28
ACTN4O43707 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.77■□□□□ 0.28
ACTN4O43707 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.77■□□□□ 0.28
ACTN4O43707 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ACTN4O43707 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ACTN4O43707 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.77■□□□□ 0.28
ACTN4O43707 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
ACTN4O43707 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.77■□□□□ 0.27
ACTN4O43707 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
ACTN4O43707 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ACTN4O43707 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ACTN4O43707 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ACTN4O43707 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ACTN4O43707 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ACTN4O43707 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
ACTN4O43707 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
ACTN4O43707 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ACTN4O43707 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
ACTN4O43707 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ACTN4O43707 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.76■□□□□ 0.27
ACTN4O43707 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
ACTN4O43707 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ACTN4O43707 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ACTN4O43707 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ACTN4O43707 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.76■□□□□ 0.27
ACTN4O43707 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ACTN4O43707 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ACTN4O43707 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ACTN4O43707 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.76■□□□□ 0.27
ACTN4O43707 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ACTN4O43707 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ACTN4O43707 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.76■□□□□ 0.27
ACTN4O43707 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ACTN4O43707 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
ACTN4O43707 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ACTN4O43707 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC16.76■□□□□ 0.27
ACTN4O43707 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ACTN4O43707 AL162726.2-201ENST00000438986 1017 ntBASIC16.76■□□□□ 0.27
ACTN4O43707 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.76■□□□□ 0.27
ACTN4O43707 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.76■□□□□ 0.27
ACTN4O43707 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ACTN4O43707 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC16.76■□□□□ 0.27
ACTN4O43707 AC190387.1-201ENST00000551683 408 ntBASIC16.76■□□□□ 0.27
ACTN4O43707 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ACTN4O43707 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ACTN4O43707 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.76■□□□□ 0.27
ACTN4O43707 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.76■□□□□ 0.27
ACTN4O43707 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.76■□□□□ 0.27
ACTN4O43707 AC012617.1-204ENST00000586340 2305 ntBASIC16.76■□□□□ 0.27
ACTN4O43707 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ACTN4O43707 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
ACTN4O43707 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ACTN4O43707 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.76■□□□□ 0.27
ACTN4O43707 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.76■□□□□ 0.27
ACTN4O43707 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.76■□□□□ 0.27
ACTN4O43707 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
ACTN4O43707 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ACTN4O43707 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ACTN4O43707 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ACTN4O43707 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ACTN4O43707 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ACTN4O43707 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ACTN4O43707 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.75■□□□□ 0.27
ACTN4O43707 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ACTN4O43707 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.75■□□□□ 0.27
ACTN4O43707 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.75■□□□□ 0.27
ACTN4O43707 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.75■□□□□ 0.27
ACTN4O43707 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.75■□□□□ 0.27
ACTN4O43707 AC140912.1-201ENST00000577171 1054 ntBASIC16.75■□□□□ 0.27
ACTN4O43707 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 AC097376.2-205ENST00000610159 5334 ntBASIC16.75■□□□□ 0.27
ACTN4O43707 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ACTN4O43707 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms