Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC188H7C350 AC023794.5-201ENST00000564380 2157 ntBASIC15.56■□□□□ 0.08
CCDC188H7C350 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC188H7C350 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC188H7C350 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC188H7C350 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CCDC188H7C350 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC188H7C350 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC188H7C350 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC188H7C350 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC188H7C350 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC188H7C350 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.56■□□□□ 0.08
CCDC188H7C350 MEIS3P1-201ENST00000495167 958 ntBASIC15.56■□□□□ 0.08
CCDC188H7C350 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC188H7C350 AC026410.3-201ENST00000514280 936 ntBASIC15.56■□□□□ 0.08
CCDC188H7C350 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC188H7C350 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.56■□□□□ 0.08
CCDC188H7C350 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC188H7C350 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC188H7C350 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC188H7C350 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.56■□□□□ 0.08
CCDC188H7C350 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.56■□□□□ 0.08
CCDC188H7C350 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC188H7C350 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.56■□□□□ 0.08
CCDC188H7C350 AC107373.2-201ENST00000607735 490 ntBASIC15.56■□□□□ 0.08
CCDC188H7C350 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC188H7C350 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC188H7C350 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC188H7C350 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC188H7C350 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCDC188H7C350 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC188H7C350 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC188H7C350 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC188H7C350 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC188H7C350 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC188H7C350 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC188H7C350 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC188H7C350 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC188H7C350 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC188H7C350 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC188H7C350 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCDC188H7C350 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC188H7C350 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC188H7C350 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC188H7C350 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CCDC188H7C350 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC188H7C350 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC188H7C350 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC188H7C350 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC188H7C350 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC188H7C350 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC188H7C350 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC188H7C350 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC188H7C350 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC188H7C350 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC188H7C350 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC188H7C350 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCDC188H7C350 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC188H7C350 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC188H7C350 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC188H7C350 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CCDC188H7C350 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC188H7C350 CLK3P2-201ENST00000427566 1453 ntBASIC15.55■□□□□ 0.08
CCDC188H7C350 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC188H7C350 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC188H7C350 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC188H7C350 AL139400.1-201ENST00000366220 510 ntBASIC15.55■□□□□ 0.08
CCDC188H7C350 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CCDC188H7C350 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC188H7C350 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCDC188H7C350 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.55■□□□□ 0.08
CCDC188H7C350 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC188H7C350 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC188H7C350 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCDC188H7C350 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.55■□□□□ 0.08
CCDC188H7C350 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC188H7C350 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC188H7C350 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.55■□□□□ 0.08
CCDC188H7C350 AL596442.2-201ENST00000610240 980 ntBASIC15.55■□□□□ 0.08
CCDC188H7C350 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.55■□□□□ 0.08
CCDC188H7C350 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC188H7C350 PRSS30P-206ENST00000641773 873 ntBASIC15.55■□□□□ 0.08
CCDC188H7C350 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC188H7C350 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC188H7C350 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC188H7C350 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC188H7C350 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC188H7C350 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CCDC188H7C350 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC188H7C350 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC188H7C350 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CCDC188H7C350 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC188H7C350 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CCDC188H7C350 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC188H7C350 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCDC188H7C350 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CCDC188H7C350 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CCDC188H7C350 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC188H7C350 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms