Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 GPAA1P2-201ENST00000417923 928 ntBASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 CNN2P10-201ENST00000443067 918 ntBASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 C2orf69P2-201ENST00000562032 1123 ntBASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 AC006058.4-201ENST00000624016 1670 ntBASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 AC055811.4-201ENST00000624039 1754 ntBASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 AC103702.1-201ENST00000548801 2630 ntBASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 AGAP7P-201ENST00000582299 2062 ntBASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 AGAP14-201ENST00000624701 2060 ntBASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 RPSAP36-202ENST00000494591 1261 ntBASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 COX5BP1-201ENST00000507622 393 ntBASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 AP001258.2-201ENST00000529891 490 ntBASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 AC104982.3-201ENST00000581995 514 ntBASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms