Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 NRADDP-201ENST00000437305 691 ntBASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 SEPHS2P1-201ENST00000511618 1162 ntBASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 AC095040.1-201ENST00000513286 675 ntBASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 AC084262.1-201ENST00000567818 751 ntBASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 SNORD3B-1-201ENST00000577988 758 ntBASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 AC020922.4-201ENST00000621389 339 ntBASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 AC009093.10-201ENST00000641956 1442 ntBASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 AL591122.2-201ENST00000624125 1853 ntBASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 LILRP1-201ENST00000444199 1370 ntBASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 OR7E115P-201ENST00000382617 1024 ntBASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 AL157823.1-201ENST00000403727 628 ntBASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 MIR2278-201ENST00000516344 96 ntBASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 AC004801.1-201ENST00000549557 360 ntBASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 HNRNPA1P5-201ENST00000558213 966 ntBASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM88BA6NKF7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 AC023090.2-201ENST00000625182 2110 ntBASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 GOLGA6L16P-201ENST00000441780 1299 ntBASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 ST13P19-201ENST00000442505 1124 ntBASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 AC113347.2-201ENST00000512350 279 ntBASIC16.93■□□□□ 0.3
TMEM88BA6NKF7 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms