Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 RN7SL774P-201ENST00000577467 290 ntBASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 MIR4783-201ENST00000580343 82 ntBASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 AC005324.6-201ENST00000587972 613 ntBASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 AP001505.2-201ENST00000616815 443 ntBASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 CU633904.3-201ENST00000624042 1029 ntBASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 AC138627.1-207ENST00000641560 1006 ntBASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.85□□□□□ -0.03
TBC1D3FA6NER0 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 UPF3AP2-201ENST00000457924 1132 ntBASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 RPL18P13-201ENST00000478088 569 ntBASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 AC245884.6-201ENST00000515672 1067 ntBASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 MIR3619-201ENST00000579667 83 ntBASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 AC026740.1-201ENST00000607068 791 ntBASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 AC090164.2-201ENST00000611487 516 ntBASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 AC100757.4-201ENST00000626934 759 ntBASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 AC092384.3-202ENST00000564646 2873 ntBASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TBC1D3FA6NER0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.83□□□□□ -0.03
TBC1D3FA6NER0 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
TBC1D3FA6NER0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TBC1D3FA6NER0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms