Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RCCD1A6NED2 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.9■□□□□ 0.14
RCCD1A6NED2 DUX4L27-201ENST00000554796 1261 ntBASIC15.9■□□□□ 0.14
RCCD1A6NED2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.9■□□□□ 0.14
RCCD1A6NED2 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC15.9■□□□□ 0.14
RCCD1A6NED2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.9■□□□□ 0.14
RCCD1A6NED2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.9■□□□□ 0.14
RCCD1A6NED2 AC036164.1-201ENST00000570544 333 ntBASIC15.9■□□□□ 0.14
RCCD1A6NED2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.9■□□□□ 0.14
RCCD1A6NED2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCCD1A6NED2 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC15.9■□□□□ 0.14
RCCD1A6NED2 AC092364.2-202ENST00000597012 1073 ntBASIC15.9■□□□□ 0.14
RCCD1A6NED2 AC004466.1-201ENST00000599515 1080 ntBASIC15.9■□□□□ 0.14
RCCD1A6NED2 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
RCCD1A6NED2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCCD1A6NED2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCCD1A6NED2 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCCD1A6NED2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RCCD1A6NED2 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCCD1A6NED2 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCCD1A6NED2 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RCCD1A6NED2 SALL4P5-201ENST00000419001 1760 ntBASIC15.9■□□□□ 0.14
RCCD1A6NED2 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.9■□□□□ 0.14
RCCD1A6NED2 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.9■□□□□ 0.14
RCCD1A6NED2 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC15.9■□□□□ 0.14
RCCD1A6NED2 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCCD1A6NED2 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCCD1A6NED2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RCCD1A6NED2 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
RCCD1A6NED2 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RCCD1A6NED2 COL6A4P2-202ENST00000504443 2753 ntBASIC15.89■□□□□ 0.13
RCCD1A6NED2 AC111170.3-201ENST00000624282 2464 ntBASIC15.89■□□□□ 0.13
RCCD1A6NED2 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RCCD1A6NED2 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RCCD1A6NED2 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RCCD1A6NED2 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RCCD1A6NED2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RCCD1A6NED2 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RCCD1A6NED2 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RCCD1A6NED2 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RCCD1A6NED2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RCCD1A6NED2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RCCD1A6NED2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RCCD1A6NED2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 MIR943-201ENST00000401286 94 ntBASIC15.89■□□□□ 0.13
RCCD1A6NED2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RCCD1A6NED2 AC104794.3-201ENST00000566840 1248 ntBASIC15.89■□□□□ 0.13
RCCD1A6NED2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 BRI3BPP1-201ENST00000594224 787 ntBASIC15.89■□□□□ 0.13
RCCD1A6NED2 AC121493.1-201ENST00000602316 450 ntBASIC15.89■□□□□ 0.13
RCCD1A6NED2 MIR8072-201ENST00000614241 80 ntBASIC15.89■□□□□ 0.13
RCCD1A6NED2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 BX539320.1-201ENST00000623759 877 ntBASIC15.89■□□□□ 0.13
RCCD1A6NED2 AC079781.4-201ENST00000641908 219 ntBASIC15.89■□□□□ 0.13
RCCD1A6NED2 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RCCD1A6NED2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RCCD1A6NED2 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RCCD1A6NED2 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RCCD1A6NED2 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.89■□□□□ 0.13
RCCD1A6NED2 TCAM1P-207ENST00000485295 1537 ntBASIC15.89■□□□□ 0.13
RCCD1A6NED2 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RCCD1A6NED2 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RCCD1A6NED2 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.88■□□□□ 0.13
RCCD1A6NED2 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RCCD1A6NED2 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RCCD1A6NED2 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RCCD1A6NED2 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.88■□□□□ 0.13
RCCD1A6NED2 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RCCD1A6NED2 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RCCD1A6NED2 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RCCD1A6NED2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.88■□□□□ 0.13
RCCD1A6NED2 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
RCCD1A6NED2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RCCD1A6NED2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RCCD1A6NED2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RCCD1A6NED2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.88■□□□□ 0.13
RCCD1A6NED2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.88■□□□□ 0.13
RCCD1A6NED2 AC007688.1-201ENST00000475592 759 ntBASIC15.88■□□□□ 0.13
RCCD1A6NED2 AC004890.2-204ENST00000481968 304 ntBASIC15.88■□□□□ 0.13
RCCD1A6NED2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.88■□□□□ 0.13
RCCD1A6NED2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.88■□□□□ 0.13
RCCD1A6NED2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms