Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 RN7SL399P-201ENST00000471648 279 ntBASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 TMEM261P1-201ENST00000604899 340 ntBASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 REXO1L2P-201ENST00000425429 2069 ntBASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX49Q9Y6V7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 MIR6775-201ENST00000617557 69 ntBASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 AC113367.3-201ENST00000508316 1912 ntBASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX49Q9Y6V7 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 AC107918.4-201ENST00000641966 3141 ntBASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 AC010319.3-201ENST00000597028 470 ntBASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DDX49Q9Y6V7 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms