Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 RPL37AP1-201ENST00000412502 279 ntBASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 AC211486.1-202ENST00000416371 468 ntBASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 AC211476.1-201ENST00000503899 468 ntBASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 AL512356.2-201ENST00000546955 174 ntBASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 AF228730.6-201ENST00000641497 218 ntBASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 AC084121.3-201ENST00000641716 218 ntBASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIMS3Q9UJD0 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 AC015922.1-201ENST00000421102 1152 ntBASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 BX842568.4-201ENST00000421222 227 ntBASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIMS3Q9UJD0 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
RIMS3Q9UJD0 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RIMS3Q9UJD0 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.18□□□□□ -0.14
RIMS3Q9UJD0 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIMS3Q9UJD0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIMS3Q9UJD0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIMS3Q9UJD0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms