Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 MIR645-201ENST00000385283 94 ntBASIC13.65□□□□□ -0.22
DKK4Q9UBT3 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 KRT18P46-201ENST00000435568 1279 ntBASIC13.65□□□□□ -0.22
DKK4Q9UBT3 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 NAV1-210ENST00000593583 726 ntBASIC13.65□□□□□ -0.22
DKK4Q9UBT3 AC010976.2-201ENST00000609697 852 ntBASIC13.65□□□□□ -0.22
DKK4Q9UBT3 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 LINC00244-201ENST00000625073 613 ntBASIC13.65□□□□□ -0.22
DKK4Q9UBT3 AC009145.4-201ENST00000625119 1294 ntBASIC13.65□□□□□ -0.22
DKK4Q9UBT3 ST5-261ENST00000626808 1071 ntTSL 5 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 AL139384.1-201ENST00000612143 3047 ntBASIC13.65□□□□□ -0.22
DKK4Q9UBT3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DKK4Q9UBT3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
DKK4Q9UBT3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
DKK4Q9UBT3 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 RN7SL767P-201ENST00000493013 295 ntBASIC13.64□□□□□ -0.23
DKK4Q9UBT3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 EMC4-208ENST00000559078 599 ntTSL 3 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 PKD1P1-201ENST00000458669 6805 ntBASIC13.64□□□□□ -0.23
DKK4Q9UBT3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
DKK4Q9UBT3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DKK4Q9UBT3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DKK4Q9UBT3 AL391005.1-201ENST00000623953 2435 ntBASIC13.63□□□□□ -0.23
DKK4Q9UBT3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms