Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 POM121L10P-201ENST00000436994 1285 ntBASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 AC005077.2-201ENST00000449786 690 ntBASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 BX284668.4-201ENST00000453917 508 ntBASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 PPY2P-201ENST00000582808 702 ntBASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 AL451050.2-201ENST00000606967 682 ntBASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 AL645728.2-202ENST00000641679 227 ntBASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 AC079178.1-201ENST00000420915 656 ntBASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 HIST2H2BC-201ENST00000498492 580 ntBASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 AC022616.1-201ENST00000518688 554 ntBASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 AP003171.2-201ENST00000528208 925 ntBASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 AC020914.3-201ENST00000594712 304 ntBASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 OR10B1P-201ENST00000601666 907 ntBASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 AC244157.2-201ENST00000616239 1006 ntBASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 FGD5P1-202ENST00000614866 2498 ntBASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 AC117489.1-201ENST00000625169 3217 ntBASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.92■□□□□ 0.3
HDAC6Q9UBN7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 AL391280.1-201ENST00000506969 1062 ntBASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.91■□□□□ 0.3
HDAC6Q9UBN7 RN7SL713P-201ENST00000582127 302 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms