Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BLOC1S4Q9NUP1 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 AC139712.1-201ENST00000378256 1875 ntBASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 BOLA2P3-201ENST00000404566 256 ntBASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 CHMP1AP1-201ENST00000445563 662 ntBASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 ACA64.2-201ENST00000459014 129 ntBASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 AC119751.2-201ENST00000504529 210 ntBASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 RAB43P1-201ENST00000561790 589 ntBASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 MIR6775-201ENST00000617557 69 ntBASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 AC002472.3-201ENST00000640124 621 ntBASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 AC015688.4-201ENST00000580780 1647 ntBASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 NORAD-201ENST00000565493 5339 ntBASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
BLOC1S4Q9NUP1 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 KHSRPP1-201ENST00000427983 1768 ntBASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 AHCYP2-201ENST00000430630 1300 ntBASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 PUDPP3-201ENST00000445368 636 ntBASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 KLF2P4-201ENST00000451959 1225 ntBASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
BLOC1S4Q9NUP1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BLOC1S4Q9NUP1 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms