Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 AL137783.1-201ENST00000623494 1896 ntBASIC13.16□□□□□ -0.3
CDH20Q9HBT6 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 AC023908.3-201ENST00000564211 3047 ntBASIC13.15□□□□□ -0.3
CDH20Q9HBT6 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.15□□□□□ -0.3
CDH20Q9HBT6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 AC055811.4-201ENST00000624039 1754 ntBASIC13.15□□□□□ -0.3
CDH20Q9HBT6 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 AC234783.1-201ENST00000441761 496 ntBASIC13.15□□□□□ -0.3
CDH20Q9HBT6 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 AC106760.1-201ENST00000508690 800 ntBASIC13.15□□□□□ -0.3
CDH20Q9HBT6 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 GRK6P1-201ENST00000400595 1711 ntBASIC13.15□□□□□ -0.3
CDH20Q9HBT6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 AC026748.1-201ENST00000624349 3251 ntBASIC13.15□□□□□ -0.3
CDH20Q9HBT6 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.15□□□□□ -0.3
CDH20Q9HBT6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CDH20Q9HBT6 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
CDH20Q9HBT6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.14□□□□□ -0.31
CDH20Q9HBT6 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDH20Q9HBT6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms