Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 AC007969.1-201ENST00000433675 447 ntBASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRC40Q9H9A6 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 SALL4P5-201ENST00000419001 1760 ntBASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 AC022447.6-201ENST00000515522 438 ntBASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC40Q9H9A6 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRRC40Q9H9A6 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.21■□□□□ 0.02
LRRC40Q9H9A6 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRRC40Q9H9A6 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LRRC40Q9H9A6 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
LRRC40Q9H9A6 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRRC40Q9H9A6 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRRC40Q9H9A6 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.21■□□□□ 0.02
LRRC40Q9H9A6 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LRRC40Q9H9A6 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 DGCR5-201ENST00000399539 862 ntBASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 CRB3P1-201ENST00000449338 276 ntBASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC40Q9H9A6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms