Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CASD1Q96PB1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASD1Q96PB1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CASD1Q96PB1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.74■□□□□ 0.11
CASD1Q96PB1 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.74■□□□□ 0.11
CASD1Q96PB1 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.74■□□□□ 0.11
CASD1Q96PB1 AC139712.1-201ENST00000378256 1875 ntBASIC15.74■□□□□ 0.11
CASD1Q96PB1 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.74■□□□□ 0.11
CASD1Q96PB1 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CASD1Q96PB1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CASD1Q96PB1 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 RNA5SP359-201ENST00000364838 113 ntBASIC15.74■□□□□ 0.11
CASD1Q96PB1 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.74■□□□□ 0.11
CASD1Q96PB1 AP000356.3-201ENST00000382243 753 ntBASIC15.74■□□□□ 0.11
CASD1Q96PB1 AL583805.1-201ENST00000391389 531 ntBASIC15.74■□□□□ 0.11
CASD1Q96PB1 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 AL592076.1-201ENST00000424448 303 ntBASIC15.74■□□□□ 0.11
CASD1Q96PB1 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.74■□□□□ 0.11
CASD1Q96PB1 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.74■□□□□ 0.11
CASD1Q96PB1 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.74■□□□□ 0.11
CASD1Q96PB1 AP000358.1-201ENST00000456260 156 ntBASIC15.74■□□□□ 0.11
CASD1Q96PB1 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.74■□□□□ 0.11
CASD1Q96PB1 PGAM1P5-201ENST00000548011 764 ntBASIC15.74■□□□□ 0.11
CASD1Q96PB1 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.74■□□□□ 0.11
CASD1Q96PB1 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.74■□□□□ 0.11
CASD1Q96PB1 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CASD1Q96PB1 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.74■□□□□ 0.11
CASD1Q96PB1 SIGLEC18P-201ENST00000602271 909 ntBASIC15.74■□□□□ 0.11
CASD1Q96PB1 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.74■□□□□ 0.11
CASD1Q96PB1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CASD1Q96PB1 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CASD1Q96PB1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.74■□□□□ 0.11
CASD1Q96PB1 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CASD1Q96PB1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASD1Q96PB1 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.73■□□□□ 0.11
CASD1Q96PB1 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASD1Q96PB1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASD1Q96PB1 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CASD1Q96PB1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASD1Q96PB1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASD1Q96PB1 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CASD1Q96PB1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASD1Q96PB1 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.73■□□□□ 0.11
CASD1Q96PB1 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CASD1Q96PB1 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.73■□□□□ 0.11
CASD1Q96PB1 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CASD1Q96PB1 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CASD1Q96PB1 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CASD1Q96PB1 MIR557-201ENST00000385239 98 ntBASIC15.73■□□□□ 0.11
CASD1Q96PB1 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CASD1Q96PB1 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CASD1Q96PB1 RPS9P1-201ENST00000419943 583 ntBASIC15.73■□□□□ 0.11
CASD1Q96PB1 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.73■□□□□ 0.11
CASD1Q96PB1 RPSAP15-201ENST00000448168 861 ntBASIC15.73■□□□□ 0.11
CASD1Q96PB1 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.73■□□□□ 0.11
CASD1Q96PB1 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CASD1Q96PB1 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.73■□□□□ 0.11
CASD1Q96PB1 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.73■□□□□ 0.11
CASD1Q96PB1 MIR4750-201ENST00000584564 56 ntBASIC15.73■□□□□ 0.11
CASD1Q96PB1 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASD1Q96PB1 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASD1Q96PB1 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CASD1Q96PB1 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASD1Q96PB1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CASD1Q96PB1 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CASD1Q96PB1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASD1Q96PB1 PPT1-215ENST00000641471 2368 ntBASIC15.73■□□□□ 0.11
CASD1Q96PB1 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CASD1Q96PB1 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CASD1Q96PB1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASD1Q96PB1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CASD1Q96PB1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASD1Q96PB1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CASD1Q96PB1 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CASD1Q96PB1 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CASD1Q96PB1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CASD1Q96PB1 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CASD1Q96PB1 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.73■□□□□ 0.11
CASD1Q96PB1 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms