Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.12□□□□□ -0.31
CPNE2Q96FN4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CPNE2Q96FN4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CPNE2Q96FN4 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 AC018442.1-201ENST00000421439 2061 ntBASIC13.11□□□□□ -0.31
CPNE2Q96FN4 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 AC107890.1-201ENST00000422478 521 ntBASIC13.11□□□□□ -0.31
CPNE2Q96FN4 TSEN15P1-201ENST00000423257 515 ntBASIC13.11□□□□□ -0.31
CPNE2Q96FN4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 AC004967.1-201ENST00000453589 447 ntBASIC13.11□□□□□ -0.31
CPNE2Q96FN4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 AC092865.5-201ENST00000545435 363 ntBASIC13.11□□□□□ -0.31
CPNE2Q96FN4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 AC140878.1-201ENST00000565277 250 ntBASIC13.11□□□□□ -0.31
CPNE2Q96FN4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 AC015911.4-201ENST00000588022 1070 ntBASIC13.11□□□□□ -0.31
CPNE2Q96FN4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 CICP17-201ENST00000418553 2377 ntBASIC13.11□□□□□ -0.31
CPNE2Q96FN4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPNE2Q96FN4 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 BTBD7P1-201ENST00000447253 1453 ntBASIC13.1□□□□□ -0.31
CPNE2Q96FN4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 AC027369.6-201ENST00000525520 931 ntBASIC13.1□□□□□ -0.31
CPNE2Q96FN4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 AL158211.3-201ENST00000607385 239 ntBASIC13.1□□□□□ -0.31
CPNE2Q96FN4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPNE2Q96FN4 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms