Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
FOXRED1Q96CU9 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
FOXRED1Q96CU9 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXRED1Q96CU9 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXRED1Q96CU9 AL031595.1-201ENST00000623969 4709 ntBASIC13.11□□□□□ -0.31
FOXRED1Q96CU9 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
FOXRED1Q96CU9 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FOXRED1Q96CU9 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FOXRED1Q96CU9 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
FOXRED1Q96CU9 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FOXRED1Q96CU9 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FOXRED1Q96CU9 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FOXRED1Q96CU9 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXRED1Q96CU9 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXRED1Q96CU9 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXRED1Q96CU9 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.11□□□□□ -0.31
FOXRED1Q96CU9 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXRED1Q96CU9 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.11□□□□□ -0.31
FOXRED1Q96CU9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 BASP1P1-201ENST00000430708 665 ntBASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
FOXRED1Q96CU9 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 SDHAP3-202ENST00000515467 728 ntBASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 RNA5SP421-201ENST00000516864 134 ntBASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.09□□□□□ -0.31
FOXRED1Q96CU9 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms