Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.84■□□□□ 0.13
ATP2A3Q93084 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATP2A3Q93084 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATP2A3Q93084 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
ATP2A3Q93084 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.13
ATP2A3Q93084 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.83■□□□□ 0.13
ATP2A3Q93084 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ATP2A3Q93084 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ATP2A3Q93084 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
ATP2A3Q93084 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.83■□□□□ 0.13
ATP2A3Q93084 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.83■□□□□ 0.12
ATP2A3Q93084 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.83■□□□□ 0.12
ATP2A3Q93084 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.83■□□□□ 0.12
ATP2A3Q93084 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.83■□□□□ 0.12
ATP2A3Q93084 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
ATP2A3Q93084 AL590640.2-201ENST00000457038 527 ntBASIC15.83■□□□□ 0.12
ATP2A3Q93084 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.83■□□□□ 0.12
ATP2A3Q93084 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.83■□□□□ 0.12
ATP2A3Q93084 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.83■□□□□ 0.12
ATP2A3Q93084 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.83■□□□□ 0.12
ATP2A3Q93084 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.83■□□□□ 0.12
ATP2A3Q93084 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
ATP2A3Q93084 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
ATP2A3Q93084 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.83■□□□□ 0.12
ATP2A3Q93084 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.83■□□□□ 0.12
ATP2A3Q93084 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 LRRC59-203ENST00000576448 1531 ntBASIC15.83■□□□□ 0.12
ATP2A3Q93084 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATP2A3Q93084 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 AC007292.2-201ENST00000593524 1812 ntBASIC15.82■□□□□ 0.12
ATP2A3Q93084 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.82■□□□□ 0.12
ATP2A3Q93084 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 TPM3P8-201ENST00000330554 643 ntBASIC15.82■□□□□ 0.12
ATP2A3Q93084 MIR326-201ENST00000362220 95 ntBASIC15.82■□□□□ 0.12
ATP2A3Q93084 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 MIR1202-201ENST00000408529 83 ntBASIC15.82■□□□□ 0.12
ATP2A3Q93084 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.82■□□□□ 0.12
ATP2A3Q93084 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A3Q93084 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms