Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 AC105250.1-201ENST00000509378 2057 ntBASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
U2AF1L4Q8WU68 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 PUDPP3-201ENST00000445368 636 ntBASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 CTBP2P4-201ENST00000513884 920 ntBASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2AF1L4Q8WU68 AC090616.6-203ENST00000579186 1945 ntBASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 MIR1227-201ENST00000408484 88 ntBASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 EIF3FP3-201ENST00000434851 1086 ntBASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 AC090857.1-201ENST00000527400 390 ntBASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 AC090164.2-201ENST00000611487 516 ntBASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2AF1L4Q8WU68 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
U2AF1L4Q8WU68 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
U2AF1L4Q8WU68 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
U2AF1L4Q8WU68 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
U2AF1L4Q8WU68 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.08■□□□□ 0.33
U2AF1L4Q8WU68 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
U2AF1L4Q8WU68 AC023157.3-201ENST00000619086 2088 ntBASIC17.08■□□□□ 0.33
U2AF1L4Q8WU68 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
U2AF1L4Q8WU68 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
U2AF1L4Q8WU68 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
U2AF1L4Q8WU68 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
U2AF1L4Q8WU68 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms