Protein–RNA interactions for Protein: Q8NFY4

SEMA6D, Semaphorin-6D, humanhuman

Predictions only

Length 1,073 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6DQ8NFY4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 GNAQP1-201ENST00000444815 1067 ntBASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 AL589987.1-201ENST00000453380 819 ntBASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 FAM86LP-201ENST00000478302 853 ntBASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 GAPDHP40-201ENST00000505218 1006 ntBASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 AC106886.1-201ENST00000568660 600 ntBASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 AL391069.4-201ENST00000609583 481 ntBASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEMA6DQ8NFY4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 RPL13AP25-201ENST00000484130 612 ntBASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 AC011495.1-201ENST00000498085 584 ntBASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 AC093004.1-201ENST00000508850 424 ntBASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 AC132938.2-201ENST00000579188 680 ntBASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 AL591163.1-201ENST00000641757 987 ntBASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEMA6DQ8NFY4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms