Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LSMEM1Q8N8F7 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.77□□□□□ -0.2
LSMEM1Q8N8F7 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
LSMEM1Q8N8F7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
LSMEM1Q8N8F7 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 RNU1-114P-201ENST00000365297 166 ntBASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 KLF2P2-201ENST00000416807 1039 ntBASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 TPT1P11-201ENST00000458482 498 ntBASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 BX640514.1-201ENST00000583223 1918 ntBASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 CHCHD2P3-201ENST00000603038 451 ntBASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 AC004233.3-201ENST00000607794 1269 ntBASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
LSMEM1Q8N8F7 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 AC006504.5-208ENST00000588784 2401 ntBASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 MYCLP2-201ENST00000449268 967 ntBASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 AL096865.1-201ENST00000606796 927 ntBASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LSMEM1Q8N8F7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms