Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 FAM197Y7-201ENST00000432892 766 ntBASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 AC025279.2-201ENST00000569730 653 ntBASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 MIR3615-201ENST00000581999 87 ntBASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 AC084346.2-201ENST00000607097 949 ntBASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 AC008687.7-202ENST00000637404 953 ntBASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 AL138799.1-201ENST00000448213 1675 ntBASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 AC018529.2-202ENST00000611482 3087 ntBASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 AC117489.1-201ENST00000625169 3217 ntBASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 LINC00552-201ENST00000625151 2579 ntBASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 MIR326-201ENST00000362220 95 ntBASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 CNN2P8-201ENST00000421872 913 ntBASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 KRT18P25-201ENST00000508931 1278 ntBASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 AC103810.3-201ENST00000583567 96 ntBASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 AL118558.3-201ENST00000607414 1079 ntBASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 AC145423.3-201ENST00000615987 467 ntBASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 AC012508.2-201ENST00000567613 1472 ntBASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 AC026748.1-201ENST00000624349 3251 ntBASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 AL158070.2-201ENST00000623713 1621 ntBASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC33Q8N5R6 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CCDC33Q8N5R6 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms