Protein–RNA interactions for Protein: Q8IWT3

CUL9, Cullin-9, humanhuman

Predictions only

Length 2,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUL9Q8IWT3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CUL9Q8IWT3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CUL9Q8IWT3 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CUL9Q8IWT3 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CUL9Q8IWT3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 AL365181.1-201ENST00000564032 1828 ntBASIC14.59□□□□□ -0.07
CUL9Q8IWT3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 PHBP3-201ENST00000412562 819 ntBASIC14.59□□□□□ -0.07
CUL9Q8IWT3 AL136084.1-201ENST00000449172 318 ntBASIC14.59□□□□□ -0.07
CUL9Q8IWT3 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 AL137783.1-201ENST00000623494 1896 ntBASIC14.59□□□□□ -0.07
CUL9Q8IWT3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 KRT18P45-201ENST00000515347 1333 ntBASIC14.59□□□□□ -0.07
CUL9Q8IWT3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 HNRNPA1P68-201ENST00000425806 979 ntBASIC14.59□□□□□ -0.07
CUL9Q8IWT3 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 ACP1-207ENST00000439645 605 ntTSL 2 BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 GYG1-209ENST00000483267 801 ntTSL 2 BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 TPI1P2-201ENST00000491343 752 ntBASIC14.59□□□□□ -0.07
CUL9Q8IWT3 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 GAS7-216ENST00000583882 553 ntTSL 5 BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 AL136982.5-201ENST00000605222 294 ntBASIC14.59□□□□□ -0.07
CUL9Q8IWT3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 AC138907.9-201ENST00000623747 986 ntBASIC14.59□□□□□ -0.07
CUL9Q8IWT3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CUL9Q8IWT3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CUL9Q8IWT3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
CUL9Q8IWT3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
CUL9Q8IWT3 RACK1-227ENST00000512805 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CUL9Q8IWT3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CUL9Q8IWT3 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CUL9Q8IWT3 LDHAL6CP-201ENST00000502352 1142 ntBASIC14.58□□□□□ -0.07
CUL9Q8IWT3 AL132994.1-201ENST00000554098 400 ntBASIC14.58□□□□□ -0.07
CUL9Q8IWT3 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC14.58□□□□□ -0.07
CUL9Q8IWT3 PIGA-209ENST00000634582 965 ntTSL 2 BASIC14.58□□□□□ -0.07
CUL9Q8IWT3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.58□□□□□ -0.07
CUL9Q8IWT3 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CUL9Q8IWT3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CUL9Q8IWT3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 RNF141-202ENST00000528665 1374 ntTSL 2 BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 RN7SKP230-201ENST00000365642 335 ntBASIC14.58□□□□□ -0.08
CUL9Q8IWT3 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 AC074019.1-201ENST00000428788 1096 ntBASIC14.58□□□□□ -0.08
CUL9Q8IWT3 EEF1GP1-201ENST00000457231 1299 ntBASIC14.58□□□□□ -0.08
CUL9Q8IWT3 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 CDIPT-AS1-203ENST00000638164 713 ntBASIC14.58□□□□□ -0.08
CUL9Q8IWT3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUL9Q8IWT3 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CUL9Q8IWT3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CUL9Q8IWT3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms