Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 SOCS2P1-201ENST00000417727 557 ntBASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 NUS1P3-201ENST00000423502 862 ntBASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 DFFBP1-201ENST00000433250 979 ntBASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 AC092552.1-201ENST00000547243 906 ntBASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 CHCHD2P3-201ENST00000603038 451 ntBASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00346Q8IVM7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 AL442647.2-201ENST00000429864 857 ntBASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms