Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 AL731571.1-201ENST00000617058 5428 ntBASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.93□□□□□ -0.02
NUDCD3Q8IVD9 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 AC090505.1-201ENST00000430515 1834 ntBASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 AC009093.7-201ENST00000623853 1223 ntBASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms