Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 AC008805.1-201ENST00000590892 364 ntBASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 AC026740.1-201ENST00000607068 791 ntBASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 AL136172.1-201ENST00000598590 1394 ntBASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE3BQ7Z3V4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.52■□□□□ 0.56
UBE3BQ7Z3V4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBE3BQ7Z3V4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.52■□□□□ 0.56
UBE3BQ7Z3V4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE3BQ7Z3V4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC18.52■□□□□ 0.56
UBE3BQ7Z3V4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE3BQ7Z3V4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE3BQ7Z3V4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE3BQ7Z3V4 AC012441.2-201ENST00000444843 739 ntBASIC18.52■□□□□ 0.56
UBE3BQ7Z3V4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC18.52■□□□□ 0.56
UBE3BQ7Z3V4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC18.52■□□□□ 0.56
UBE3BQ7Z3V4 AC068587.10-201ENST00000641210 219 ntBASIC18.52■□□□□ 0.56
UBE3BQ7Z3V4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE3BQ7Z3V4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE3BQ7Z3V4 AC136759.1-202ENST00000530858 2194 ntBASIC18.52■□□□□ 0.56
UBE3BQ7Z3V4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBE3BQ7Z3V4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBE3BQ7Z3V4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.52■□□□□ 0.55
UBE3BQ7Z3V4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.52■□□□□ 0.55
UBE3BQ7Z3V4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.52■□□□□ 0.55
UBE3BQ7Z3V4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBE3BQ7Z3V4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
UBE3BQ7Z3V4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC18.52■□□□□ 0.55
UBE3BQ7Z3V4 AC104640.1-201ENST00000562617 2109 ntBASIC18.52■□□□□ 0.55
UBE3BQ7Z3V4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBE3BQ7Z3V4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBE3BQ7Z3V4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 ACTG1P2-201ENST00000415776 1125 ntBASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 ACTG1P11-201ENST00000425411 1125 ntBASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 HLA-J-204ENST00000495278 958 ntBASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 MARK2P5-201ENST00000507649 634 ntBASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 SCARNA21-201ENST00000517026 139 ntBASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 AL160314.3-201ENST00000556041 767 ntBASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 AC018529.2-202ENST00000611482 3087 ntBASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE3BQ7Z3V4 MRPL37P1-201ENST00000592451 1337 ntBASIC18.5■□□□□ 0.55
UBE3BQ7Z3V4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBE3BQ7Z3V4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms