Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 AC114501.2-201ENST00000439631 535 ntBASIC15.13■□□□□ 0.01
RAPH1Q70E73 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 AC092337.1-201ENST00000568699 1129 ntBASIC15.13■□□□□ 0.01
RAPH1Q70E73 DMBT1P1-203ENST00000636837 4628 ntBASIC15.13■□□□□ 0.01
RAPH1Q70E73 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 AP001267.2-201ENST00000532619 2086 ntBASIC15.13■□□□□ 0.01
RAPH1Q70E73 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 PTENP1-202ENST00000532280 3996 ntBASIC15.13■□□□□ 0.01
RAPH1Q70E73 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAPH1Q70E73 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
RAPH1Q70E73 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RAPH1Q70E73 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
RAPH1Q70E73 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.12■□□□□ 0.01
RAPH1Q70E73 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.12■□□□□ 0.01
RAPH1Q70E73 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 CICP17-201ENST00000418553 2377 ntBASIC15.12■□□□□ 0.01
RAPH1Q70E73 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RAPH1Q70E73 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.12■□□□□ 0.01
RAPH1Q70E73 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RAPH1Q70E73 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.12■□□□□ 0.01
RAPH1Q70E73 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.12■□□□□ 0.01
RAPH1Q70E73 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 AC241585.1-201ENST00000433527 519 ntBASIC15.12■□□□□ 0.01
RAPH1Q70E73 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.12■□□□□ 0.01
RAPH1Q70E73 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC15.12■□□□□ 0.01
RAPH1Q70E73 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.12■□□□□ 0.01
RAPH1Q70E73 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RAPH1Q70E73 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.12■□□□□ 0.01
RAPH1Q70E73 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAPH1Q70E73 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.12■□□□□ 0.01
RAPH1Q70E73 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RAPH1Q70E73 AL359183.1-201ENST00000623796 2132 ntBASIC15.11■□□□□ 0.01
RAPH1Q70E73 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RAPH1Q70E73 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAPH1Q70E73 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms