Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 FUCA1P1-201ENST00000374476 1351 ntBASIC12.7□□□□□ -0.38
LRRK2Q5S007 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 OR8T1P-201ENST00000421347 918 ntBASIC12.7□□□□□ -0.38
LRRK2Q5S007 AL773545.2-201ENST00000442149 472 ntBASIC12.7□□□□□ -0.38
LRRK2Q5S007 AL035414.1-201ENST00000451327 857 ntBASIC12.7□□□□□ -0.38
LRRK2Q5S007 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 AC079414.2-201ENST00000567157 1104 ntBASIC12.7□□□□□ -0.38
LRRK2Q5S007 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 LINC00528-201ENST00000600723 2160 ntBASIC12.7□□□□□ -0.38
LRRK2Q5S007 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 DBET-201ENST00000630918 3363 ntBASIC12.7□□□□□ -0.38
LRRK2Q5S007 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 AC073869.2-201ENST00000417338 1026 ntBASIC12.69□□□□□ -0.38
LRRK2Q5S007 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 CSTP2-201ENST00000610599 398 ntBASIC12.69□□□□□ -0.38
LRRK2Q5S007 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 AC021321.1-201ENST00000607397 1113 ntBASIC12.69□□□□□ -0.38
LRRK2Q5S007 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms