Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 OR10B1P-201ENST00000601666 907 ntBASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 AC006453.4-201ENST00000636949 1252 ntBASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 AC063926.3-201ENST00000624734 5658 ntBASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 AGGF1P1-201ENST00000509500 2073 ntBASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 AC006001.1-201ENST00000325130 474 ntBASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 AC112492.5-201ENST00000421897 457 ntBASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 TPT1P11-201ENST00000458482 498 ntBASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 KRT17P8-201ENST00000540749 863 ntBASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTPN20Q4JDL3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTPN20Q4JDL3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTPN20Q4JDL3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTPN20Q4JDL3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTPN20Q4JDL3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
PTPN20Q4JDL3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PTPN20Q4JDL3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTPN20Q4JDL3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
PTPN20Q4JDL3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTPN20Q4JDL3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.71■□□□□ 0.1
PTPN20Q4JDL3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.71■□□□□ 0.1
PTPN20Q4JDL3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 MRPL37P1-201ENST00000592451 1337 ntBASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 CD8B2-202ENST00000417670 633 ntBASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 FAM8A4P-201ENST00000435433 1213 ntBASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 AP000812.2-201ENST00000538934 718 ntBASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 AL512343.1-201ENST00000605837 169 ntBASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 AL162274.1-201ENST00000617191 1098 ntBASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTPN20Q4JDL3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms