Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CXCR4P61073 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CXCR4P61073 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCR4P61073 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CXCR4P61073 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCR4P61073 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.67□□□□□ -0.22
CXCR4P61073 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCR4P61073 GPS2P2-201ENST00000430745 888 ntBASIC13.67□□□□□ -0.22
CXCR4P61073 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCR4P61073 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCR4P61073 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.67□□□□□ -0.22
CXCR4P61073 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCR4P61073 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCR4P61073 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.67□□□□□ -0.22
CXCR4P61073 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.67□□□□□ -0.22
CXCR4P61073 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCR4P61073 AL079307.3-201ENST00000556114 283 ntBASIC13.67□□□□□ -0.22
CXCR4P61073 AC026150.2-201ENST00000564693 1156 ntBASIC13.67□□□□□ -0.22
CXCR4P61073 MIR6074-201ENST00000612054 107 ntBASIC13.67□□□□□ -0.22
CXCR4P61073 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 MIR6069-201ENST00000620069 79 ntBASIC13.67□□□□□ -0.22
CXCR4P61073 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
CXCR4P61073 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CXCR4P61073 AC090643.2-201ENST00000623442 2029 ntBASIC13.67□□□□□ -0.22
CXCR4P61073 CR383656.2-201ENST00000548656 2254 ntBASIC13.67□□□□□ -0.22
CXCR4P61073 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CXCR4P61073 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.67□□□□□ -0.22
CXCR4P61073 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCR4P61073 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.66□□□□□ -0.22
CXCR4P61073 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.66□□□□□ -0.22
CXCR4P61073 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 AC005562.1-201ENST00000583030 3219 ntBASIC13.66□□□□□ -0.22
CXCR4P61073 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CXCR4P61073 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CXCR4P61073 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 Z97205.2-201ENST00000564697 1639 ntBASIC13.66□□□□□ -0.22
CXCR4P61073 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CXCR4P61073 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.66□□□□□ -0.22
CXCR4P61073 KRT18P64-201ENST00000434946 1219 ntBASIC13.66□□□□□ -0.22
CXCR4P61073 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.66□□□□□ -0.22
CXCR4P61073 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.66□□□□□ -0.22
CXCR4P61073 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.66□□□□□ -0.22
CXCR4P61073 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.66□□□□□ -0.22
CXCR4P61073 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.66□□□□□ -0.22
CXCR4P61073 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CXCR4P61073 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CXCR4P61073 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 CLK3P2-201ENST00000427566 1453 ntBASIC13.66□□□□□ -0.22
CXCR4P61073 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CXCR4P61073 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.66□□□□□ -0.22
CXCR4P61073 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CXCR4P61073 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.66□□□□□ -0.22
CXCR4P61073 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.66□□□□□ -0.22
CXCR4P61073 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCR4P61073 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCR4P61073 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCR4P61073 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CXCR4P61073 KRT8P35-201ENST00000483942 1338 ntBASIC13.65□□□□□ -0.22
CXCR4P61073 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCR4P61073 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCR4P61073 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms