Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN20P56880 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CLDN20P56880 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN20P56880 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN20P56880 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN20P56880 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN20P56880 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN20P56880 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN20P56880 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN20P56880 OR8S1-201ENST00000310194 1080 ntBASIC13.78□□□□□ -0.2
CLDN20P56880 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CLDN20P56880 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.78□□□□□ -0.2
CLDN20P56880 AC005229.1-201ENST00000392885 409 ntBASIC13.78□□□□□ -0.2
CLDN20P56880 AC104457.1-201ENST00000401024 814 ntBASIC13.78□□□□□ -0.2
CLDN20P56880 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.78□□□□□ -0.2
CLDN20P56880 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN20P56880 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN20P56880 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN20P56880 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.78□□□□□ -0.2
CLDN20P56880 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.78□□□□□ -0.2
CLDN20P56880 GPR53P-205ENST00000457298 1084 ntBASIC13.78□□□□□ -0.2
CLDN20P56880 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN20P56880 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN20P56880 RAB43P1-201ENST00000561790 589 ntBASIC13.78□□□□□ -0.2
CLDN20P56880 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.78□□□□□ -0.2
CLDN20P56880 AC106886.1-201ENST00000568660 600 ntBASIC13.78□□□□□ -0.2
CLDN20P56880 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN20P56880 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN20P56880 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN20P56880 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CLDN20P56880 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN20P56880 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN20P56880 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN20P56880 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN20P56880 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN20P56880 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN20P56880 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN20P56880 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN20P56880 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN20P56880 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN20P56880 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.78□□□□□ -0.2
CLDN20P56880 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN20P56880 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CLDN20P56880 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN20P56880 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN20P56880 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN20P56880 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN20P56880 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN20P56880 CICP17-201ENST00000418553 2377 ntBASIC13.78□□□□□ -0.2
CLDN20P56880 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.77□□□□□ -0.2
CLDN20P56880 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLDN20P56880 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLDN20P56880 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLDN20P56880 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.2
CLDN20P56880 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDN20P56880 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.77□□□□□ -0.21
CLDN20P56880 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 KLF2P2-201ENST00000416807 1039 ntBASIC13.77□□□□□ -0.21
CLDN20P56880 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.77□□□□□ -0.21
CLDN20P56880 GHSR-202ENST00000427970 912 ntBASIC13.77□□□□□ -0.21
CLDN20P56880 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.77□□□□□ -0.21
CLDN20P56880 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 AL355864.2-201ENST00000447420 863 ntBASIC13.77□□□□□ -0.21
CLDN20P56880 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.77□□□□□ -0.21
CLDN20P56880 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.77□□□□□ -0.21
CLDN20P56880 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.77□□□□□ -0.21
CLDN20P56880 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
CLDN20P56880 KRT18P25-201ENST00000508931 1278 ntBASIC13.77□□□□□ -0.21
CLDN20P56880 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.77□□□□□ -0.21
CLDN20P56880 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.77□□□□□ -0.21
CLDN20P56880 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CLDN20P56880 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CLDN20P56880 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.77□□□□□ -0.21
CLDN20P56880 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 AL512343.1-201ENST00000605837 169 ntBASIC13.77□□□□□ -0.21
CLDN20P56880 AL022328.1-201ENST00000610050 478 ntBASIC13.77□□□□□ -0.21
CLDN20P56880 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDN20P56880 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
CLDN20P56880 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN20P56880 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms