Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.89■□□□□ 0.13
CACNA2D1P54289 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CACNA2D1P54289 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.89■□□□□ 0.13
CACNA2D1P54289 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CACNA2D1P54289 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CACNA2D1P54289 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CACNA2D1P54289 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CACNA2D1P54289 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CACNA2D1P54289 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CACNA2D1P54289 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CACNA2D1P54289 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CACNA2D1P54289 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.89■□□□□ 0.13
CACNA2D1P54289 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.89■□□□□ 0.13
CACNA2D1P54289 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.89■□□□□ 0.13
CACNA2D1P54289 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CACNA2D1P54289 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CACNA2D1P54289 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.89■□□□□ 0.13
CACNA2D1P54289 COX5BP1-201ENST00000507622 393 ntBASIC15.89■□□□□ 0.13
CACNA2D1P54289 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.89■□□□□ 0.13
CACNA2D1P54289 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.89■□□□□ 0.13
CACNA2D1P54289 RN7SL560P-201ENST00000577943 264 ntBASIC15.89■□□□□ 0.13
CACNA2D1P54289 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.89■□□□□ 0.13
CACNA2D1P54289 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.89■□□□□ 0.13
CACNA2D1P54289 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CACNA2D1P54289 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.89■□□□□ 0.13
CACNA2D1P54289 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CACNA2D1P54289 ZBED1P1-201ENST00000502364 1930 ntBASIC15.89■□□□□ 0.13
CACNA2D1P54289 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.89■□□□□ 0.13
CACNA2D1P54289 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.89■□□□□ 0.13
CACNA2D1P54289 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.89■□□□□ 0.13
CACNA2D1P54289 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.89■□□□□ 0.13
CACNA2D1P54289 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CACNA2D1P54289 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CACNA2D1P54289 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CACNA2D1P54289 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CACNA2D1P54289 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CACNA2D1P54289 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CACNA2D1P54289 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CACNA2D1P54289 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.89■□□□□ 0.13
CACNA2D1P54289 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CACNA2D1P54289 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.89■□□□□ 0.13
CACNA2D1P54289 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CACNA2D1P54289 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CACNA2D1P54289 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CACNA2D1P54289 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CACNA2D1P54289 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CACNA2D1P54289 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CACNA2D1P54289 RN7SKP230-201ENST00000365642 335 ntBASIC15.88■□□□□ 0.13
CACNA2D1P54289 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CACNA2D1P54289 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CACNA2D1P54289 ACTBP11-201ENST00000436287 1126 ntBASIC15.88■□□□□ 0.13
CACNA2D1P54289 GOLGA2P4-201ENST00000441462 777 ntBASIC15.88■□□□□ 0.13
CACNA2D1P54289 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 RN7SL713P-201ENST00000582127 302 ntBASIC15.88■□□□□ 0.13
CACNA2D1P54289 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 MIR6799-201ENST00000620297 69 ntBASIC15.88■□□□□ 0.13
CACNA2D1P54289 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CACNA2D1P54289 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CACNA2D1P54289 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CACNA2D1P54289 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CACNA2D1P54289 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CACNA2D1P54289 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CACNA2D1P54289 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CACNA2D1P54289 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CACNA2D1P54289 FKBP4P6-201ENST00000457486 1332 ntBASIC15.88■□□□□ 0.13
CACNA2D1P54289 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CACNA2D1P54289 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CACNA2D1P54289 AC011840.2-201ENST00000563063 1520 ntBASIC15.88■□□□□ 0.13
CACNA2D1P54289 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.88■□□□□ 0.13
CACNA2D1P54289 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CACNA2D1P54289 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.87■□□□□ 0.13
CACNA2D1P54289 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CACNA2D1P54289 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.87■□□□□ 0.13
CACNA2D1P54289 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CACNA2D1P54289 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CACNA2D1P54289 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.87■□□□□ 0.13
CACNA2D1P54289 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CACNA2D1P54289 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CACNA2D1P54289 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CACNA2D1P54289 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms