Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 HSPA8P5-201ENST00000456928 2069 ntBASIC13.64□□□□□ -0.23
HMGA2P52926 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.64□□□□□ -0.23
HMGA2P52926 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HMGA2P52926 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HMGA2P52926 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HMGA2P52926 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.64□□□□□ -0.23
HMGA2P52926 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.64□□□□□ -0.23
HMGA2P52926 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
HMGA2P52926 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HMGA2P52926 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.64□□□□□ -0.23
HMGA2P52926 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
HMGA2P52926 AC067863.1-201ENST00000494933 530 ntBASIC13.64□□□□□ -0.23
HMGA2P52926 SPDYE18-201ENST00000510091 1050 ntBASIC13.64□□□□□ -0.23
HMGA2P52926 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.64□□□□□ -0.23
HMGA2P52926 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.64□□□□□ -0.23
HMGA2P52926 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
HMGA2P52926 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.64□□□□□ -0.23
HMGA2P52926 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.64□□□□□ -0.23
HMGA2P52926 AC134684.3-201ENST00000641758 218 ntBASIC13.64□□□□□ -0.23
HMGA2P52926 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.64□□□□□ -0.23
HMGA2P52926 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HMGA2P52926 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
HMGA2P52926 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.64□□□□□ -0.23
HMGA2P52926 AC011498.7-201ENST00000624986 2027 ntBASIC13.64□□□□□ -0.23
HMGA2P52926 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HMGA2P52926 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.64□□□□□ -0.23
HMGA2P52926 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HMGA2P52926 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGA2P52926 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMGA2P52926 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGA2P52926 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGA2P52926 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGA2P52926 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGA2P52926 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMGA2P52926 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.63□□□□□ -0.23
HMGA2P52926 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMGA2P52926 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
HMGA2P52926 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.63□□□□□ -0.23
HMGA2P52926 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGA2P52926 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGA2P52926 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGA2P52926 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMGA2P52926 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.63□□□□□ -0.23
HMGA2P52926 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.63□□□□□ -0.23
HMGA2P52926 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.63□□□□□ -0.23
HMGA2P52926 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HMGA2P52926 AC103988.2-201ENST00000561804 725 ntBASIC13.63□□□□□ -0.23
HMGA2P52926 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.63□□□□□ -0.23
HMGA2P52926 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
HMGA2P52926 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HMGA2P52926 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.63□□□□□ -0.23
HMGA2P52926 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGA2P52926 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
HMGA2P52926 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGA2P52926 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGA2P52926 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMGA2P52926 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGA2P52926 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.63□□□□□ -0.23
HMGA2P52926 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMGA2P52926 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMGA2P52926 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HMGA2P52926 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HMGA2P52926 AL138725.1-201ENST00000407347 1314 ntBASIC13.63□□□□□ -0.23
HMGA2P52926 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HMGA2P52926 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGA2P52926 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HMGA2P52926 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
HMGA2P52926 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HMGA2P52926 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
HMGA2P52926 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.62□□□□□ -0.23
HMGA2P52926 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.62□□□□□ -0.23
HMGA2P52926 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.62□□□□□ -0.23
HMGA2P52926 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
HMGA2P52926 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HMGA2P52926 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms