Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.19□□□□□ -0.14
CLK1P49759 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLK1P49759 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.19□□□□□ -0.14
CLK1P49759 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.19□□□□□ -0.14
CLK1P49759 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.19□□□□□ -0.14
CLK1P49759 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.19□□□□□ -0.14
CLK1P49759 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 TIMM17BP1-201ENST00000545713 516 ntBASIC14.19□□□□□ -0.14
CLK1P49759 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLK1P49759 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.19□□□□□ -0.14
CLK1P49759 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.19□□□□□ -0.14
CLK1P49759 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CLK1P49759 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLK1P49759 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.19□□□□□ -0.14
CLK1P49759 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 MBLAC2-202ENST00000514906 1936 ntBASIC14.19□□□□□ -0.14
CLK1P49759 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLK1P49759 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLK1P49759 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.18□□□□□ -0.14
CLK1P49759 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.18□□□□□ -0.14
CLK1P49759 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.18□□□□□ -0.14
CLK1P49759 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.18□□□□□ -0.14
CLK1P49759 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.18□□□□□ -0.14
CLK1P49759 CICP17-201ENST00000418553 2377 ntBASIC14.18□□□□□ -0.14
CLK1P49759 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CLK1P49759 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.18□□□□□ -0.14
CLK1P49759 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.18□□□□□ -0.14
CLK1P49759 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC14.18□□□□□ -0.14
CLK1P49759 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CLK1P49759 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CLK1P49759 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.18□□□□□ -0.14
CLK1P49759 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.18□□□□□ -0.14
CLK1P49759 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.18□□□□□ -0.14
CLK1P49759 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.18□□□□□ -0.14
CLK1P49759 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.18□□□□□ -0.14
CLK1P49759 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.18□□□□□ -0.14
CLK1P49759 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CLK1P49759 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.18□□□□□ -0.14
CLK1P49759 AC044860.1-202ENST00000559481 777 ntBASIC14.18□□□□□ -0.14
CLK1P49759 AC092337.1-201ENST00000568699 1129 ntBASIC14.18□□□□□ -0.14
CLK1P49759 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.18□□□□□ -0.14
CLK1P49759 AL109936.8-201ENST00000641772 604 ntBASIC14.18□□□□□ -0.14
CLK1P49759 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
CLK1P49759 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.18□□□□□ -0.14
CLK1P49759 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
CLK1P49759 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CLK1P49759 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.18□□□□□ -0.14
CLK1P49759 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.18□□□□□ -0.14
CLK1P49759 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.18□□□□□ -0.14
CLK1P49759 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 AC138969.3-201ENST00000546612 1459 ntBASIC14.18□□□□□ -0.14
CLK1P49759 AC138932.2-201ENST00000548268 1459 ntBASIC14.18□□□□□ -0.14
CLK1P49759 AC126755.4-201ENST00000549796 1459 ntBASIC14.18□□□□□ -0.14
CLK1P49759 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLK1P49759 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.17□□□□□ -0.14
CLK1P49759 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.17□□□□□ -0.14
CLK1P49759 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
CLK1P49759 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms