Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HTTP42858 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.25■□□□□ 0.19
HTTP42858 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HTTP42858 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HTTP42858 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HTTP42858 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HTTP42858 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HTTP42858 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HTTP42858 AL121949.3-201ENST00000406684 385 ntBASIC16.24■□□□□ 0.19
HTTP42858 IFNWP2-201ENST00000431203 580 ntBASIC16.24■□□□□ 0.19
HTTP42858 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HTTP42858 GPX3-202ENST00000517973 612 ntTSL 3 BASIC16.24■□□□□ 0.19
HTTP42858 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC16.24■□□□□ 0.19
HTTP42858 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HTTP42858 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HTTP42858 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC16.24■□□□□ 0.19
HTTP42858 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.24■□□□□ 0.19
HTTP42858 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HTTP42858 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HTTP42858 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HTTP42858 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC16.24■□□□□ 0.19
HTTP42858 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.24■□□□□ 0.19
HTTP42858 AC025594.1-201ENST00000469533 543 ntBASIC16.24■□□□□ 0.19
HTTP42858 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC16.24■□□□□ 0.19
HTTP42858 AC078814.4-201ENST00000546650 327 ntBASIC16.24■□□□□ 0.19
HTTP42858 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.24■□□□□ 0.19
HTTP42858 AC006986.1-201ENST00000612764 241 ntBASIC16.24■□□□□ 0.19
HTTP42858 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HTTP42858 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC16.24■□□□□ 0.19
HTTP42858 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HTTP42858 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.24■□□□□ 0.19
HTTP42858 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HTTP42858 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HTTP42858 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.24■□□□□ 0.19
HTTP42858 TPT1P6-201ENST00000458298 514 ntBASIC16.23■□□□□ 0.19
HTTP42858 CASP3-205ENST00000517513 964 ntTSL 5 BASIC16.23■□□□□ 0.19
HTTP42858 LY6E-215ENST00000523847 427 ntTSL 3 BASIC16.23■□□□□ 0.19
HTTP42858 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HTTP42858 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC16.23■□□□□ 0.19
HTTP42858 FKBP4P8-201ENST00000610931 1369 ntBASIC16.23■□□□□ 0.19
HTTP42858 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.23■□□□□ 0.19
HTTP42858 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.23■□□□□ 0.19
HTTP42858 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.23■□□□□ 0.19
HTTP42858 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HTTP42858 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HTTP42858 PCDHA1-201ENST00000378133 2726 ntBASIC16.23■□□□□ 0.19
HTTP42858 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HTTP42858 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HTTP42858 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HTTP42858 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HTTP42858 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HTTP42858 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HTTP42858 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HTTP42858 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HTTP42858 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.23■□□□□ 0.19
HTTP42858 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC16.23■□□□□ 0.19
HTTP42858 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.23■□□□□ 0.19
HTTP42858 KRT18P4-201ENST00000422599 1288 ntBASIC16.23■□□□□ 0.19
HTTP42858 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HTTP42858 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.23■□□□□ 0.19
HTTP42858 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC16.23■□□□□ 0.19
HTTP42858 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HTTP42858 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.23■□□□□ 0.19
HTTP42858 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.23■□□□□ 0.19
HTTP42858 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HTTP42858 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HTTP42858 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HTTP42858 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.23■□□□□ 0.19
HTTP42858 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HTTP42858 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HTTP42858 AC073869.2-201ENST00000417338 1026 ntBASIC16.23■□□□□ 0.19
HTTP42858 C18orf15-201ENST00000623680 2534 ntBASIC16.23■□□□□ 0.19
HTTP42858 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HTTP42858 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.22■□□□□ 0.19
HTTP42858 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HTTP42858 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HTTP42858 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.22■□□□□ 0.19
HTTP42858 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.22■□□□□ 0.19
HTTP42858 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HTTP42858 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
HTTP42858 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC16.22■□□□□ 0.19
HTTP42858 VENTXP4-201ENST00000449029 958 ntBASIC16.22■□□□□ 0.19
HTTP42858 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC16.22■□□□□ 0.19
HTTP42858 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.22■□□□□ 0.19
HTTP42858 MIR6893-201ENST00000613458 69 ntBASIC16.22■□□□□ 0.19
HTTP42858 AC005865.2-202ENST00000635814 725 ntBASIC16.22■□□□□ 0.19
HTTP42858 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.22■□□□□ 0.19
HTTP42858 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HTTP42858 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HTTP42858 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.22■□□□□ 0.19
HTTP42858 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HTTP42858 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HTTP42858 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HTTP42858 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.22■□□□□ 0.19
HTTP42858 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HTTP42858 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC16.22■□□□□ 0.19
HTTP42858 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.22■□□□□ 0.19
HTTP42858 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HTTP42858 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HTTP42858 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms