Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CEACAM3P40198 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.28□□□□□ -0.44
CEACAM3P40198 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.28□□□□□ -0.44
CEACAM3P40198 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CEACAM3P40198 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
CEACAM3P40198 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CEACAM3P40198 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CEACAM3P40198 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
CEACAM3P40198 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CEACAM3P40198 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CEACAM3P40198 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CEACAM3P40198 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.27□□□□□ -0.44
CEACAM3P40198 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.27□□□□□ -0.44
CEACAM3P40198 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
CEACAM3P40198 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
CEACAM3P40198 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CEACAM3P40198 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.44
CEACAM3P40198 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CEACAM3P40198 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
CEACAM3P40198 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.27□□□□□ -0.44
CEACAM3P40198 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
CEACAM3P40198 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CEACAM3P40198 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
CEACAM3P40198 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.27□□□□□ -0.44
CEACAM3P40198 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.27□□□□□ -0.44
CEACAM3P40198 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 TPM3P8-201ENST00000330554 643 ntBASIC12.27□□□□□ -0.45
CEACAM3P40198 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CEACAM3P40198 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.27□□□□□ -0.45
CEACAM3P40198 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.27□□□□□ -0.45
CEACAM3P40198 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.27□□□□□ -0.45
CEACAM3P40198 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.27□□□□□ -0.45
CEACAM3P40198 AC016694.1-201ENST00000434179 700 ntBASIC12.27□□□□□ -0.45
CEACAM3P40198 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.27□□□□□ -0.45
CEACAM3P40198 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.27□□□□□ -0.45
CEACAM3P40198 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.27□□□□□ -0.45
CEACAM3P40198 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CEACAM3P40198 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.27□□□□□ -0.45
CEACAM3P40198 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.27□□□□□ -0.45
CEACAM3P40198 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.27□□□□□ -0.45
CEACAM3P40198 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.27□□□□□ -0.45
CEACAM3P40198 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CEACAM3P40198 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.27□□□□□ -0.45
CEACAM3P40198 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.27□□□□□ -0.45
CEACAM3P40198 AC145423.3-201ENST00000615987 467 ntBASIC12.27□□□□□ -0.45
CEACAM3P40198 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.27□□□□□ -0.45
CEACAM3P40198 AL035252.4-201ENST00000624174 288 ntBASIC12.27□□□□□ -0.45
CEACAM3P40198 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.27□□□□□ -0.45
CEACAM3P40198 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.27□□□□□ -0.45
CEACAM3P40198 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.27□□□□□ -0.45
CEACAM3P40198 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.27□□□□□ -0.45
CEACAM3P40198 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.27□□□□□ -0.45
CEACAM3P40198 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CEACAM3P40198 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
CEACAM3P40198 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.27□□□□□ -0.45
CEACAM3P40198 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.27□□□□□ -0.45
CEACAM3P40198 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CEACAM3P40198 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CEACAM3P40198 DBET-201ENST00000630918 3363 ntBASIC12.27□□□□□ -0.45
CEACAM3P40198 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CEACAM3P40198 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CEACAM3P40198 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.27□□□□□ -0.45
CEACAM3P40198 ACE3P-201ENST00000423435 1973 ntBASIC12.27□□□□□ -0.45
CEACAM3P40198 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.27□□□□□ -0.45
CEACAM3P40198 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.27□□□□□ -0.45
CEACAM3P40198 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CEACAM3P40198 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.27□□□□□ -0.45
CEACAM3P40198 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CEACAM3P40198 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CEACAM3P40198 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.26□□□□□ -0.45
CEACAM3P40198 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms