Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COPB2P35606 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COPB2P35606 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COPB2P35606 AC136621.1-201ENST00000624017 2304 ntBASIC17.03■□□□□ 0.32
COPB2P35606 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.03■□□□□ 0.32
COPB2P35606 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COPB2P35606 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COPB2P35606 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPB2P35606 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COPB2P35606 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.03■□□□□ 0.32
COPB2P35606 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.03■□□□□ 0.32
COPB2P35606 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
COPB2P35606 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.03■□□□□ 0.32
COPB2P35606 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.03■□□□□ 0.32
COPB2P35606 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COPB2P35606 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
COPB2P35606 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COPB2P35606 MIR6720-201ENST00000611664 98 ntBASIC17.03■□□□□ 0.32
COPB2P35606 AC027601.3-201ENST00000622907 509 ntBASIC17.03■□□□□ 0.32
COPB2P35606 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPB2P35606 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COPB2P35606 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COPB2P35606 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPB2P35606 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COPB2P35606 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPB2P35606 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPB2P35606 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.03■□□□□ 0.32
COPB2P35606 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.03■□□□□ 0.32
COPB2P35606 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
COPB2P35606 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
COPB2P35606 LINC02228-204ENST00000642115 2962 ntBASIC17.03■□□□□ 0.32
COPB2P35606 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.03■□□□□ 0.32
COPB2P35606 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPB2P35606 TNRC18P2-201ENST00000417666 2714 ntBASIC17.03■□□□□ 0.32
COPB2P35606 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COPB2P35606 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPB2P35606 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPB2P35606 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
COPB2P35606 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.02■□□□□ 0.32
COPB2P35606 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COPB2P35606 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COPB2P35606 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
COPB2P35606 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.02■□□□□ 0.32
COPB2P35606 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COPB2P35606 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.02■□□□□ 0.32
COPB2P35606 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COPB2P35606 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COPB2P35606 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
COPB2P35606 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COPB2P35606 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COPB2P35606 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COPB2P35606 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
COPB2P35606 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.02■□□□□ 0.32
COPB2P35606 ISCA2P1-201ENST00000425548 448 ntBASIC17.02■□□□□ 0.32
COPB2P35606 AC078875.1-201ENST00000431907 724 ntBASIC17.02■□□□□ 0.32
COPB2P35606 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.02■□□□□ 0.32
COPB2P35606 GCOM2-201ENST00000509133 1104 ntBASIC17.02■□□□□ 0.32
COPB2P35606 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.02■□□□□ 0.32
COPB2P35606 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
COPB2P35606 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.02■□□□□ 0.32
COPB2P35606 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
COPB2P35606 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.02■□□□□ 0.32
COPB2P35606 Z98259.2-201ENST00000641583 609 ntBASIC17.02■□□□□ 0.32
COPB2P35606 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COPB2P35606 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
COPB2P35606 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COPB2P35606 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COPB2P35606 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COPB2P35606 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
COPB2P35606 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COPB2P35606 SALL4P5-201ENST00000419001 1760 ntBASIC17.02■□□□□ 0.31
COPB2P35606 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.02■□□□□ 0.31
COPB2P35606 MROH4P-201ENST00000431302 1578 ntBASIC17.02■□□□□ 0.31
COPB2P35606 FAM90A7P-201ENST00000382628 1395 ntBASIC17.02■□□□□ 0.31
COPB2P35606 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
COPB2P35606 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
COPB2P35606 FAM90A23P-201ENST00000400136 1395 ntBASIC17.02■□□□□ 0.31
COPB2P35606 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COPB2P35606 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COPB2P35606 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COPB2P35606 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.01■□□□□ 0.31
COPB2P35606 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COPB2P35606 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.01■□□□□ 0.31
COPB2P35606 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COPB2P35606 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.01■□□□□ 0.31
COPB2P35606 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COPB2P35606 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
COPB2P35606 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.01■□□□□ 0.31
COPB2P35606 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.01■□□□□ 0.31
COPB2P35606 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.01■□□□□ 0.31
COPB2P35606 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COPB2P35606 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.01■□□□□ 0.31
COPB2P35606 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COPB2P35606 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
COPB2P35606 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COPB2P35606 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COPB2P35606 AC234782.1-201ENST00000451950 919 ntBASIC17.01■□□□□ 0.31
COPB2P35606 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.01■□□□□ 0.31
COPB2P35606 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.01■□□□□ 0.31
COPB2P35606 AC131206.1-201ENST00000538078 1211 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms