Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HOXA6P31267 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HOXA6P31267 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HOXA6P31267 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.52□□□□□ -0.08
HOXA6P31267 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
HOXA6P31267 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HOXA6P31267 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HOXA6P31267 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.52□□□□□ -0.08
HOXA6P31267 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.52□□□□□ -0.08
HOXA6P31267 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
HOXA6P31267 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HOXA6P31267 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HOXA6P31267 WASH3P-207ENST00000560956 1394 ntBASIC14.52□□□□□ -0.08
HOXA6P31267 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
HOXA6P31267 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HOXA6P31267 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.52□□□□□ -0.09
HOXA6P31267 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
HOXA6P31267 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
HOXA6P31267 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
HOXA6P31267 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.52□□□□□ -0.09
HOXA6P31267 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HOXA6P31267 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.52□□□□□ -0.09
HOXA6P31267 HCG27-204ENST00000424675 895 ntTSL 3 BASIC14.52□□□□□ -0.09
HOXA6P31267 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.52□□□□□ -0.09
HOXA6P31267 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.52□□□□□ -0.09
HOXA6P31267 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC14.52□□□□□ -0.09
HOXA6P31267 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC14.52□□□□□ -0.09
HOXA6P31267 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.52□□□□□ -0.09
HOXA6P31267 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
HOXA6P31267 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.52□□□□□ -0.09
HOXA6P31267 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC14.52□□□□□ -0.09
HOXA6P31267 RN7SL665P-201ENST00000578793 300 ntBASIC14.52□□□□□ -0.09
HOXA6P31267 AP001527.2-201ENST00000614441 631 ntBASIC14.52□□□□□ -0.09
HOXA6P31267 ETV2-207ENST00000619399 994 ntTSL 5 BASIC14.52□□□□□ -0.09
HOXA6P31267 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.52□□□□□ -0.09
HOXA6P31267 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HOXA6P31267 PCDHA1-201ENST00000378133 2726 ntBASIC14.52□□□□□ -0.09
HOXA6P31267 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HOXA6P31267 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HOXA6P31267 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HOXA6P31267 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HOXA6P31267 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HOXA6P31267 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HOXA6P31267 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HOXA6P31267 AC013726.1-201ENST00000563747 2285 ntBASIC14.52□□□□□ -0.09
HOXA6P31267 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HOXA6P31267 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.51□□□□□ -0.09
HOXA6P31267 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
HOXA6P31267 AL513523.2-202ENST00000427283 2040 ntBASIC14.51□□□□□ -0.09
HOXA6P31267 AP003680.1-201ENST00000598970 3660 ntBASIC14.51□□□□□ -0.09
HOXA6P31267 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.51□□□□□ -0.09
HOXA6P31267 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 AL122018.1-201ENST00000446607 2310 ntBASIC14.51□□□□□ -0.09
HOXA6P31267 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
HOXA6P31267 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
HOXA6P31267 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.51□□□□□ -0.09
HOXA6P31267 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.51□□□□□ -0.09
HOXA6P31267 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 AC073869.2-201ENST00000417338 1026 ntBASIC14.51□□□□□ -0.09
HOXA6P31267 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC14.51□□□□□ -0.09
HOXA6P31267 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.51□□□□□ -0.09
HOXA6P31267 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.51□□□□□ -0.09
HOXA6P31267 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.51□□□□□ -0.09
HOXA6P31267 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HOXA6P31267 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.51□□□□□ -0.09
HOXA6P31267 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HOXA6P31267 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXA6P31267 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXA6P31267 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.5□□□□□ -0.09
HOXA6P31267 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.5□□□□□ -0.09
HOXA6P31267 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
HOXA6P31267 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HOXA6P31267 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.5□□□□□ -0.09
HOXA6P31267 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXA6P31267 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXA6P31267 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXA6P31267 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HOXA6P31267 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXA6P31267 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HOXA6P31267 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
HOXA6P31267 TEKT4P2-202ENST00000559466 1312 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms