Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 AC006486.2-201ENST00000624246 2199 ntBASIC13.58□□□□□ -0.24
GDF1P27539 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 SALL4P5-201ENST00000419001 1760 ntBASIC13.58□□□□□ -0.24
GDF1P27539 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
GDF1P27539 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.57□□□□□ -0.24
GDF1P27539 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
GDF1P27539 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.57□□□□□ -0.24
GDF1P27539 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.57□□□□□ -0.24
GDF1P27539 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.57□□□□□ -0.24
GDF1P27539 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 INE2-201ENST00000630399 1874 ntBASIC13.57□□□□□ -0.24
GDF1P27539 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.57□□□□□ -0.24
GDF1P27539 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
GDF1P27539 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
GDF1P27539 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.57□□□□□ -0.24
GDF1P27539 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.57□□□□□ -0.24
GDF1P27539 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.57□□□□□ -0.24
GDF1P27539 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.57□□□□□ -0.24
GDF1P27539 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.57□□□□□ -0.24
GDF1P27539 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.57□□□□□ -0.24
GDF1P27539 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.57□□□□□ -0.24
GDF1P27539 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.57□□□□□ -0.24
GDF1P27539 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.57□□□□□ -0.24
GDF1P27539 AC104982.3-201ENST00000581995 514 ntBASIC13.57□□□□□ -0.24
GDF1P27539 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
GDF1P27539 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.57□□□□□ -0.24
GDF1P27539 AL096828.3-201ENST00000615354 462 ntBASIC13.57□□□□□ -0.24
GDF1P27539 AP001002.3-201ENST00000623482 206 ntBASIC13.57□□□□□ -0.24
GDF1P27539 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.57□□□□□ -0.24
GDF1P27539 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
GDF1P27539 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
GDF1P27539 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
GDF1P27539 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDF1P27539 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
GDF1P27539 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.56□□□□□ -0.24
GDF1P27539 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.56□□□□□ -0.24
GDF1P27539 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDF1P27539 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GDF1P27539 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.56□□□□□ -0.24
GDF1P27539 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.56□□□□□ -0.24
GDF1P27539 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDF1P27539 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
GDF1P27539 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDF1P27539 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
GDF1P27539 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDF1P27539 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
GDF1P27539 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GDF1P27539 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDF1P27539 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDF1P27539 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDF1P27539 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
GDF1P27539 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.56□□□□□ -0.24
GDF1P27539 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDF1P27539 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDF1P27539 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.56□□□□□ -0.24
GDF1P27539 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDF1P27539 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.56□□□□□ -0.24
GDF1P27539 TLE1P1-201ENST00000422965 589 ntBASIC13.56□□□□□ -0.24
GDF1P27539 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.56□□□□□ -0.24
GDF1P27539 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.56□□□□□ -0.24
GDF1P27539 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDF1P27539 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.56□□□□□ -0.24
GDF1P27539 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.56□□□□□ -0.24
GDF1P27539 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.56□□□□□ -0.24
GDF1P27539 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.56□□□□□ -0.24
GDF1P27539 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GDF1P27539 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.56□□□□□ -0.24
GDF1P27539 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms