Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTX3P26022 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTX3P26022 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.39□□□□□ -0.11
PTX3P26022 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTX3P26022 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.39□□□□□ -0.11
PTX3P26022 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTX3P26022 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
PTX3P26022 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PTX3P26022 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PTX3P26022 TLE1P1-201ENST00000422965 589 ntBASIC14.39□□□□□ -0.11
PTX3P26022 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.39□□□□□ -0.11
PTX3P26022 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.39□□□□□ -0.11
PTX3P26022 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.39□□□□□ -0.11
PTX3P26022 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.39□□□□□ -0.11
PTX3P26022 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.39□□□□□ -0.11
PTX3P26022 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.39□□□□□ -0.11
PTX3P26022 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.39□□□□□ -0.11
PTX3P26022 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.39□□□□□ -0.11
PTX3P26022 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTX3P26022 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTX3P26022 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTX3P26022 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTX3P26022 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
PTX3P26022 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTX3P26022 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PTX3P26022 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTX3P26022 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTX3P26022 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PTX3P26022 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTX3P26022 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.39□□□□□ -0.11
PTX3P26022 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.39□□□□□ -0.11
PTX3P26022 AC134312.5-201ENST00000568031 1313 ntBASIC14.39□□□□□ -0.11
PTX3P26022 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTX3P26022 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTX3P26022 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.39□□□□□ -0.11
PTX3P26022 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.38□□□□□ -0.11
PTX3P26022 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PTX3P26022 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PTX3P26022 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PTX3P26022 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PTX3P26022 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.38□□□□□ -0.11
PTX3P26022 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PTX3P26022 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PTX3P26022 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PTX3P26022 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PTX3P26022 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.38□□□□□ -0.11
PTX3P26022 AC012441.1-201ENST00000446669 685 ntBASIC14.38□□□□□ -0.11
PTX3P26022 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PTX3P26022 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.38□□□□□ -0.11
PTX3P26022 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.38□□□□□ -0.11
PTX3P26022 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PTX3P26022 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PTX3P26022 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.38□□□□□ -0.11
PTX3P26022 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
PTX3P26022 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PTX3P26022 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PTX3P26022 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PTX3P26022 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PTX3P26022 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.38□□□□□ -0.11
PTX3P26022 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PTX3P26022 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTX3P26022 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.38□□□□□ -0.11
PTX3P26022 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTX3P26022 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTX3P26022 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTX3P26022 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTX3P26022 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTX3P26022 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PTX3P26022 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTX3P26022 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTX3P26022 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.37□□□□□ -0.11
PTX3P26022 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.37□□□□□ -0.11
PTX3P26022 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTX3P26022 AC007969.1-201ENST00000433675 447 ntBASIC14.37□□□□□ -0.11
PTX3P26022 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTX3P26022 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.37□□□□□ -0.11
PTX3P26022 RN7SL752P-201ENST00000463779 287 ntBASIC14.37□□□□□ -0.11
PTX3P26022 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PTX3P26022 TDH-203ENST00000531764 1110 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms