Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.47□□□□□ -0.09
CAPN3P20807 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.47□□□□□ -0.09
CAPN3P20807 AL137783.1-201ENST00000623494 1896 ntBASIC14.47□□□□□ -0.09
CAPN3P20807 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CAPN3P20807 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 TSSK5P-201ENST00000423978 907 ntBASIC14.47□□□□□ -0.09
CAPN3P20807 HLA-K-203ENST00000430151 1046 ntBASIC14.47□□□□□ -0.09
CAPN3P20807 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.47□□□□□ -0.09
CAPN3P20807 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CAPN3P20807 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.47□□□□□ -0.09
CAPN3P20807 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.47□□□□□ -0.09
CAPN3P20807 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.47□□□□□ -0.09
CAPN3P20807 AC106886.1-201ENST00000568660 600 ntBASIC14.47□□□□□ -0.09
CAPN3P20807 AC140912.1-201ENST00000577171 1054 ntBASIC14.47□□□□□ -0.09
CAPN3P20807 AL606495.2-201ENST00000605867 535 ntBASIC14.47□□□□□ -0.09
CAPN3P20807 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.47□□□□□ -0.09
CAPN3P20807 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.47□□□□□ -0.09
CAPN3P20807 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.47□□□□□ -0.09
CAPN3P20807 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CAPN3P20807 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.47□□□□□ -0.09
CAPN3P20807 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CAPN3P20807 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CAPN3P20807 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN3P20807 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.46□□□□□ -0.09
CAPN3P20807 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN3P20807 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.46□□□□□ -0.09
CAPN3P20807 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.46□□□□□ -0.09
CAPN3P20807 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN3P20807 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.46□□□□□ -0.09
CAPN3P20807 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CAPN3P20807 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN3P20807 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN3P20807 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN3P20807 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN3P20807 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
CAPN3P20807 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN3P20807 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.46□□□□□ -0.09
CAPN3P20807 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.46□□□□□ -0.09
CAPN3P20807 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.46□□□□□ -0.09
CAPN3P20807 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.46□□□□□ -0.09
CAPN3P20807 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.46□□□□□ -0.09
CAPN3P20807 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.46□□□□□ -0.09
CAPN3P20807 HLA-V-204ENST00000476601 1289 ntBASIC14.46□□□□□ -0.09
CAPN3P20807 RN7SL618P-201ENST00000477850 296 ntBASIC14.46□□□□□ -0.09
CAPN3P20807 AC004066.1-201ENST00000502488 802 ntBASIC14.46□□□□□ -0.09
CAPN3P20807 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.46□□□□□ -0.09
CAPN3P20807 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN3P20807 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.46□□□□□ -0.09
CAPN3P20807 AC084346.2-201ENST00000607097 949 ntBASIC14.46□□□□□ -0.09
CAPN3P20807 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN3P20807 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN3P20807 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.46□□□□□ -0.09
CAPN3P20807 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN3P20807 AGGF1P1-201ENST00000509500 2073 ntBASIC14.46□□□□□ -0.09
CAPN3P20807 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.46□□□□□ -0.09
CAPN3P20807 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.46□□□□□ -0.09
CAPN3P20807 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CAPN3P20807 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.46□□□□□ -0.1
CAPN3P20807 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CAPN3P20807 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CAPN3P20807 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CAPN3P20807 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.46□□□□□ -0.1
CAPN3P20807 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
CAPN3P20807 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CAPN3P20807 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CAPN3P20807 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CAPN3P20807 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
CAPN3P20807 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CAPN3P20807 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
CAPN3P20807 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CAPN3P20807 AC016397.2-201ENST00000624848 1985 ntBASIC14.45□□□□□ -0.1
CAPN3P20807 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CAPN3P20807 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.45□□□□□ -0.1
CAPN3P20807 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.45□□□□□ -0.1
CAPN3P20807 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CAPN3P20807 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CAPN3P20807 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CAPN3P20807 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.45□□□□□ -0.1
CAPN3P20807 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CAPN3P20807 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CAPN3P20807 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CAPN3P20807 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CAPN3P20807 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.45□□□□□ -0.1
CAPN3P20807 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CAPN3P20807 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CAPN3P20807 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms