Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFRAP16234 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PDGFRAP16234 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFRAP16234 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFRAP16234 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFRAP16234 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PDGFRAP16234 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFRAP16234 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFRAP16234 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFRAP16234 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.73■□□□□ 0.11
PDGFRAP16234 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PDGFRAP16234 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
PDGFRAP16234 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDGFRAP16234 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFRAP16234 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.72■□□□□ 0.11
PDGFRAP16234 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFRAP16234 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
PDGFRAP16234 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFRAP16234 SALL4P5-201ENST00000419001 1760 ntBASIC15.72■□□□□ 0.11
PDGFRAP16234 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFRAP16234 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PDGFRAP16234 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PDGFRAP16234 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFRAP16234 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
PDGFRAP16234 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.72■□□□□ 0.11
PDGFRAP16234 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.72■□□□□ 0.11
PDGFRAP16234 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFRAP16234 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFRAP16234 MIR1909-201ENST00000411312 80 ntBASIC15.72■□□□□ 0.11
PDGFRAP16234 AC007969.1-201ENST00000433675 447 ntBASIC15.72■□□□□ 0.11
PDGFRAP16234 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.72■□□□□ 0.11
PDGFRAP16234 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.72■□□□□ 0.11
PDGFRAP16234 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
PDGFRAP16234 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.72■□□□□ 0.11
PDGFRAP16234 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.72■□□□□ 0.11
PDGFRAP16234 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.72■□□□□ 0.11
PDGFRAP16234 SNX29P1-201ENST00000548357 1007 ntBASIC15.72■□□□□ 0.11
PDGFRAP16234 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.72■□□□□ 0.11
PDGFRAP16234 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.72■□□□□ 0.11
PDGFRAP16234 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFRAP16234 ENPP7P14-201ENST00000621765 1040 ntBASIC15.72■□□□□ 0.11
PDGFRAP16234 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.72■□□□□ 0.11
PDGFRAP16234 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFRAP16234 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFRAP16234 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PDGFRAP16234 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.72■□□□□ 0.11
PDGFRAP16234 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFRAP16234 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFRAP16234 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFRAP16234 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.72■□□□□ 0.11
PDGFRAP16234 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFRAP16234 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.72■□□□□ 0.11
PDGFRAP16234 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFRAP16234 FAM45BP-202ENST00000592932 1624 ntBASIC15.72■□□□□ 0.11
PDGFRAP16234 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.72■□□□□ 0.11
PDGFRAP16234 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDGFRAP16234 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFRAP16234 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.71■□□□□ 0.11
PDGFRAP16234 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PDGFRAP16234 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.71■□□□□ 0.11
PDGFRAP16234 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.71■□□□□ 0.11
PDGFRAP16234 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.71■□□□□ 0.11
PDGFRAP16234 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.71■□□□□ 0.11
PDGFRAP16234 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFRAP16234 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFRAP16234 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFRAP16234 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFRAP16234 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.71■□□□□ 0.11
PDGFRAP16234 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.71■□□□□ 0.11
PDGFRAP16234 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFRAP16234 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFRAP16234 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFRAP16234 AC113367.3-201ENST00000508316 1912 ntBASIC15.71■□□□□ 0.11
PDGFRAP16234 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PDGFRAP16234 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFRAP16234 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFRAP16234 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.71■□□□□ 0.11
PDGFRAP16234 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFRAP16234 MIR658-201ENST00000385210 100 ntBASIC15.71■□□□□ 0.11
PDGFRAP16234 AC092933.1-201ENST00000393644 945 ntBASIC15.71■□□□□ 0.11
PDGFRAP16234 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.71■□□□□ 0.11
PDGFRAP16234 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.71■□□□□ 0.11
PDGFRAP16234 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.71■□□□□ 0.11
PDGFRAP16234 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PDGFRAP16234 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.71■□□□□ 0.11
PDGFRAP16234 AC022210.1-201ENST00000449856 793 ntBASIC15.71■□□□□ 0.11
PDGFRAP16234 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.71■□□□□ 0.11
PDGFRAP16234 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PDGFRAP16234 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.71■□□□□ 0.11
PDGFRAP16234 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PDGFRAP16234 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PDGFRAP16234 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.71■□□□□ 0.11
PDGFRAP16234 RN7SL48P-201ENST00000579283 293 ntBASIC15.71■□□□□ 0.11
PDGFRAP16234 GNRHR2-203ENST00000581100 1187 ntBASIC15.71■□□□□ 0.11
PDGFRAP16234 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.71■□□□□ 0.11
PDGFRAP16234 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PDGFRAP16234 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.71■□□□□ 0.11
PDGFRAP16234 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFRAP16234 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFRAP16234 PDIA3P1-201ENST00000471856 1510 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms