Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 AC117489.1-201ENST00000625169 3217 ntBASIC13.44□□□□□ -0.26
HLA-DOBP13765 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 AC098614.1-201ENST00000368528 745 ntBASIC13.44□□□□□ -0.26
HLA-DOBP13765 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 FO681548.1-201ENST00000455617 1132 ntBASIC13.44□□□□□ -0.26
HLA-DOBP13765 AC068587.3-201ENST00000526613 355 ntBASIC13.44□□□□□ -0.26
HLA-DOBP13765 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 PTP4A1P2-201ENST00000546033 454 ntBASIC13.44□□□□□ -0.26
HLA-DOBP13765 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 AL596325.1-201ENST00000563991 1082 ntBASIC13.44□□□□□ -0.26
HLA-DOBP13765 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 AC027307.3-201ENST00000594262 1100 ntBASIC13.44□□□□□ -0.26
HLA-DOBP13765 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DOBP13765 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HLA-DOBP13765 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 INE1-201ENST00000456273 945 ntBASIC13.43□□□□□ -0.26
HLA-DOBP13765 AC106760.1-201ENST00000508690 800 ntBASIC13.43□□□□□ -0.26
HLA-DOBP13765 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 AC132938.2-201ENST00000579188 680 ntBASIC13.43□□□□□ -0.26
HLA-DOBP13765 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 AL591163.1-201ENST00000641757 987 ntBASIC13.43□□□□□ -0.26
HLA-DOBP13765 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DOBP13765 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.43□□□□□ -0.26
HLA-DOBP13765 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms