Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 FKBP4P6-201ENST00000457486 1332 ntBASIC17.6■□□□□ 0.41
TOP1P11387 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.6■□□□□ 0.41
TOP1P11387 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 ZBED1P1-201ENST00000502364 1930 ntBASIC17.6■□□□□ 0.41
TOP1P11387 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.6■□□□□ 0.41
TOP1P11387 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.6■□□□□ 0.41
TOP1P11387 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 AC023908.3-201ENST00000564211 3047 ntBASIC17.6■□□□□ 0.41
TOP1P11387 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOP1P11387 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOP1P11387 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TOP1P11387 SNX18-202ENST00000343017 3140 ntBASIC17.59■□□□□ 0.41
TOP1P11387 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.59■□□□□ 0.41
TOP1P11387 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.59■□□□□ 0.41
TOP1P11387 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.59■□□□□ 0.41
TOP1P11387 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TOP1P11387 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TOP1P11387 AC007292.2-201ENST00000593524 1812 ntBASIC17.59■□□□□ 0.41
TOP1P11387 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOP1P11387 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TOP1P11387 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOP1P11387 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TOP1P11387 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOP1P11387 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOP1P11387 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOP1P11387 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TOP1P11387 ACTBP11-201ENST00000436287 1126 ntBASIC17.59■□□□□ 0.41
TOP1P11387 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.59■□□□□ 0.41
TOP1P11387 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TOP1P11387 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.59■□□□□ 0.41
TOP1P11387 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.59■□□□□ 0.41
TOP1P11387 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.59■□□□□ 0.41
TOP1P11387 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.59■□□□□ 0.41
TOP1P11387 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.59■□□□□ 0.41
TOP1P11387 MIR6799-201ENST00000620297 69 ntBASIC17.59■□□□□ 0.41
TOP1P11387 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TOP1P11387 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOP1P11387 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.59■□□□□ 0.41
TOP1P11387 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.59■□□□□ 0.41
TOP1P11387 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.59■□□□□ 0.41
TOP1P11387 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.59■□□□□ 0.41
TOP1P11387 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TOP1P11387 AC023090.2-201ENST00000625182 2110 ntBASIC17.59■□□□□ 0.41
TOP1P11387 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOP1P11387 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TOP1P11387 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TOP1P11387 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TOP1P11387 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TOP1P11387 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.58■□□□□ 0.41
TOP1P11387 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TOP1P11387 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.58■□□□□ 0.41
TOP1P11387 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.58■□□□□ 0.41
TOP1P11387 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TOP1P11387 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TOP1P11387 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.58■□□□□ 0.41
TOP1P11387 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TOP1P11387 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TOP1P11387 AP000593.2-201ENST00000542775 1433 ntBASIC17.58■□□□□ 0.41
TOP1P11387 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TOP1P11387 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TOP1P11387 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TOP1P11387 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
TOP1P11387 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOP1P11387 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOP1P11387 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TOP1P11387 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.58■□□□□ 0.4
TOP1P11387 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.58■□□□□ 0.4
TOP1P11387 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOP1P11387 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOP1P11387 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TOP1P11387 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOP1P11387 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOP1P11387 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOP1P11387 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.58■□□□□ 0.4
TOP1P11387 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.58■□□□□ 0.4
TOP1P11387 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TOP1P11387 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TOP1P11387 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TOP1P11387 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TOP1P11387 FAM86HP-204ENST00000513466 959 ntBASIC17.58■□□□□ 0.4
TOP1P11387 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.58■□□□□ 0.4
TOP1P11387 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.58■□□□□ 0.4
TOP1P11387 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOP1P11387 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.58■□□□□ 0.4
TOP1P11387 PPY2P-201ENST00000582808 702 ntBASIC17.58■□□□□ 0.4
TOP1P11387 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TOP1P11387 ZACNP1-201ENST00000612259 710 ntBASIC17.58■□□□□ 0.4
TOP1P11387 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.58■□□□□ 0.4
TOP1P11387 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.58■□□□□ 0.4
TOP1P11387 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms