Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 AL807761.2-201ENST00000422849 729 ntBASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 TSPY25P-201ENST00000429463 745 ntBASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 CHCHD2P9-201ENST00000461726 456 ntBASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 AC087392.5-201ENST00000612517 489 ntBASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 STRN-202ENST00000379213 2254 ntTSL 5 BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSB-PGBD3P0DP91 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 FAS-202ENST00000352159 1722 ntTSL 5 BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 BANF1P3-201ENST00000412556 261 ntBASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 AC097065.1-201ENST00000425737 517 ntBASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 PIN4P1-201ENST00000451079 396 ntBASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 IGHV3-37-201ENST00000518544 340 ntBASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 AC131206.1-201ENST00000538078 1211 ntBASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 VPS18-202ENST00000558474 873 ntTSL 3 BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 MIR3188-201ENST00000583494 85 ntBASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 AL161773.1-201ENST00000624845 863 ntBASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 REXO1L2P-201ENST00000425429 2069 ntBASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 AC007292.2-201ENST00000593524 1812 ntBASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CSB-PGBD3P0DP91 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 MIR557-201ENST00000385239 98 ntBASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 XBP1P1-201ENST00000436573 652 ntBASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 RPSAP15-201ENST00000448168 861 ntBASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 KRT18P66-201ENST00000452970 1269 ntBASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 AC018463.1-201ENST00000456674 917 ntBASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSB-PGBD3P0DP91 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms