Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 AC138035.3-201ENST00000622706 2791 ntBASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 REXO1L4P-201ENST00000605109 1937 ntBASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 AC007292.2-201ENST00000593524 1812 ntBASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 RN7SKP175-201ENST00000408472 289 ntBASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 AC005077.2-201ENST00000449786 690 ntBASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 EIF4HP1-201ENST00000453115 687 ntBASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 NDUFV2P1-201ENST00000596415 907 ntBASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 AC106872.11-201ENST00000605838 421 ntBASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 AL157414.3-201ENST00000624276 1954 ntBASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40ALP0C0E4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 IGHJ2P-201ENST00000454480 60 ntBASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 TUBB8P8-201ENST00000458717 1058 ntBASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 AC021723.1-201ENST00000486306 515 ntBASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40ALP0C0E4 ACTG1P17-201ENST00000558391 1119 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms