Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.67□□□□□ -0.22
P04436 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.67□□□□□ -0.22
P04436 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.67□□□□□ -0.22
P04436 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.67□□□□□ -0.22
P04436 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04436 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04436 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04436 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 AL138725.1-201ENST00000407347 1314 ntBASIC13.66□□□□□ -0.22
P04436 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.66□□□□□ -0.22
P04436 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
P04436 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.66□□□□□ -0.22
P04436 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.66□□□□□ -0.22
P04436 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
P04436 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.66□□□□□ -0.22
P04436 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.66□□□□□ -0.22
P04436 AC020910.5-201ENST00000623668 1865 ntBASIC13.66□□□□□ -0.22
P04436 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.66□□□□□ -0.22
P04436 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
P04436 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.66□□□□□ -0.22
P04436 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.66□□□□□ -0.22
P04436 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 AL591846.1-201ENST00000451736 433 ntBASIC13.66□□□□□ -0.22
P04436 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.66□□□□□ -0.22
P04436 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.66□□□□□ -0.22
P04436 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.66□□□□□ -0.22
P04436 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.66□□□□□ -0.22
P04436 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.66□□□□□ -0.22
P04436 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
P04436 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.66□□□□□ -0.22
P04436 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.66□□□□□ -0.22
P04436 MIR4683-201ENST00000579659 81 ntBASIC13.66□□□□□ -0.22
P04436 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
P04436 AP001002.3-201ENST00000623482 206 ntBASIC13.66□□□□□ -0.22
P04436 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.66□□□□□ -0.22
P04436 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.66□□□□□ -0.22
P04436 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.66□□□□□ -0.22
P04436 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
P04436 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
P04436 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 LINC00554-201ENST00000564841 3011 ntBASIC13.66□□□□□ -0.22
P04436 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
P04436 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04436 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.65□□□□□ -0.22
P04436 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04436 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04436 INE2-201ENST00000630399 1874 ntBASIC13.65□□□□□ -0.22
P04436 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
P04436 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04436 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
P04436 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04436 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.65□□□□□ -0.22
P04436 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
P04436 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04436 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.65□□□□□ -0.22
P04436 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04436 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04436 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.65□□□□□ -0.22
P04436 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04436 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.65□□□□□ -0.22
P04436 HSPB1P2-201ENST00000448722 546 ntBASIC13.65□□□□□ -0.22
P04436 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.65□□□□□ -0.22
P04436 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.65□□□□□ -0.22
P04436 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.65□□□□□ -0.22
P04436 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.65□□□□□ -0.22
P04436 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04436 AC005695.3-201ENST00000614522 232 ntBASIC13.65□□□□□ -0.22
P04436 AL096828.3-201ENST00000615354 462 ntBASIC13.65□□□□□ -0.22
P04436 SBF1P1-201ENST00000444527 5631 ntBASIC13.65□□□□□ -0.22
P04436 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.65□□□□□ -0.22
P04436 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms