Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.06■□□□□ 0
RFPL1O75677 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.05■□□□□ 0
RFPL1O75677 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RFPL1O75677 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.05■□□□□ 0
RFPL1O75677 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.05■□□□□ 0
RFPL1O75677 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
RFPL1O75677 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.05■□□□□ 0
RFPL1O75677 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
RFPL1O75677 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.05■□□□□ 0
RFPL1O75677 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.05■□□□□ 0
RFPL1O75677 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.05■□□□□ 0
RFPL1O75677 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.05■□□□□ -0
RFPL1O75677 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RFPL1O75677 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RFPL1O75677 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.05■□□□□ -0
RFPL1O75677 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RFPL1O75677 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.05■□□□□ -0
RFPL1O75677 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.05■□□□□ -0
RFPL1O75677 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.05■□□□□ -0
RFPL1O75677 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.05■□□□□ -0
RFPL1O75677 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.05■□□□□ -0
RFPL1O75677 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.05■□□□□ -0
RFPL1O75677 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.05■□□□□ -0
RFPL1O75677 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.05■□□□□ -0
RFPL1O75677 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.05■□□□□ -0
RFPL1O75677 SPDYE18-201ENST00000510091 1050 ntBASIC15.05■□□□□ -0
RFPL1O75677 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.05■□□□□ -0
RFPL1O75677 TIMM17BP1-201ENST00000545713 516 ntBASIC15.05■□□□□ -0
RFPL1O75677 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.05■□□□□ -0
RFPL1O75677 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.05■□□□□ -0
RFPL1O75677 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.05■□□□□ -0
RFPL1O75677 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.05■□□□□ -0
RFPL1O75677 MIR6799-201ENST00000620297 69 ntBASIC15.05■□□□□ -0
RFPL1O75677 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.05■□□□□ -0
RFPL1O75677 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RFPL1O75677 CLK3P2-201ENST00000427566 1453 ntBASIC15.05■□□□□ -0
RFPL1O75677 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.05■□□□□ -0
RFPL1O75677 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.05■□□□□ -0
RFPL1O75677 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.05■□□□□ -0
RFPL1O75677 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RFPL1O75677 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.05■□□□□ -0
RFPL1O75677 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.05■□□□□ -0
RFPL1O75677 AC016397.2-201ENST00000624848 1985 ntBASIC15.05■□□□□ -0
RFPL1O75677 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
RFPL1O75677 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RFPL1O75677 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.05■□□□□ -0
RFPL1O75677 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
RFPL1O75677 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
RFPL1O75677 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RFPL1O75677 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RFPL1O75677 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.04■□□□□ -0
RFPL1O75677 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.04■□□□□ -0
RFPL1O75677 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RFPL1O75677 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.04■□□□□ -0
RFPL1O75677 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFPL1O75677 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFPL1O75677 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RFPL1O75677 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFPL1O75677 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.04■□□□□ -0
RFPL1O75677 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
RFPL1O75677 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.04■□□□□ -0
RFPL1O75677 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.04■□□□□ -0
RFPL1O75677 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RFPL1O75677 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.04■□□□□ -0
RFPL1O75677 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFPL1O75677 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFPL1O75677 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.04■□□□□ -0
RFPL1O75677 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.04■□□□□ -0
RFPL1O75677 DRD5P1-201ENST00000456605 1438 ntBASIC15.04■□□□□ -0
RFPL1O75677 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.04■□□□□ -0
RFPL1O75677 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFPL1O75677 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFPL1O75677 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFPL1O75677 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
RFPL1O75677 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFPL1O75677 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RFPL1O75677 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.04■□□□□ -0
RFPL1O75677 RPS2P32-201ENST00000439199 892 ntBASIC15.04■□□□□ -0
RFPL1O75677 TTTY23B-201ENST00000442790 549 ntBASIC15.04■□□□□ -0
RFPL1O75677 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
RFPL1O75677 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.04■□□□□ -0
RFPL1O75677 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.04■□□□□ -0
RFPL1O75677 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.04■□□□□ -0
RFPL1O75677 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.04■□□□□ -0
RFPL1O75677 SRD5A3P1-201ENST00000603021 949 ntBASIC15.04■□□□□ -0
RFPL1O75677 AC004790.1-201ENST00000612686 536 ntBASIC15.04■□□□□ -0
RFPL1O75677 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
RFPL1O75677 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RFPL1O75677 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFPL1O75677 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFPL1O75677 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.04■□□□□ -0
RFPL1O75677 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RFPL1O75677 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.03■□□□□ -0
RFPL1O75677 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.03■□□□□ -0
RFPL1O75677 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms